Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi938g00009 ATGGGACTGAGGAGGAAAGGTGGTAAGGGAACACCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGATTGCATGGATTGATGGTGAGGTGACACAAATCAATGGCACAAATGCCACCATCATTACCACAGATGGGAAAACTGTGGTGGCAGAAATTTCAAGTATATACCCTAAAGATACAGAGGCACCACCTGCAGGGGTTGATGACATGACCAAGCTAGCATACCTCCACGAGCCAGGAGTCCTGCATAACCTTGCCATTCGTTTTTCTCTCAATGAGATATATACATATACAGGAAATATCTTAATAGCAGTGAATCCTTTTCGAAGACTACCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTGAGTCCTCACCTTTTTGCTGTAGCAGACACCTGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACAAAAATGCTAATGAGATATCTAGCCTTCATGGGGGGTAGATCAGGTACAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTTAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTTGAAAGGTCACGAGTTTGCCAGATCTCTGAGCCGGAGAGAAACTATCATTGCTTTTACATGCTTTGTTCAGCACCACCAGAGGATGTCAAAAAGTACAAGCTAGGAGATCCAAGGCAATTCCACTATCTTAATCAATCAAGCTGTTACGAAGTGTCAAATGTAGATGATGCAAAGGAATACTTGGAGACCAGAAATGCAATGGACATTGTAGGTATCAGCCAGGATGAGCAGGATGCCATCTTTCGTGTGGTAGCTGCAATCCTTCATCTTGGAAACATTAACTTTGTCAAAGGGAGTGAAGTTGATTCTTCCAAACTGAAAGATGACAAATCACTCTTCCACCTTCGAACAGTTGCAGAGTTATTCATGATTGTGGACAAGATTAACAATTCAATTGGTCAAGATTCCAATGCACATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAAGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAAGATGTTCTTGACCTTATTGAGAAGAAACCAGGGGGGATTATTGCTCTTCTAGATGAAGCCTGCATGTTCCCCAAGTCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATACAAAGGACACAAGCGCTTCAGCAGCCTAAACTTTCTCGAACAAATTTCACAATTAACCACTATGCTGGAGATATCATTTCTTGATAAAAATAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCGTTTGTTGCTAATCTTTTCCCTCCTCTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGTTTTGGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGATAGTTGTGCTGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTTGATCGCTTTGGAATGCTAGCCCCCGATGTCCTTGATGGATCTGATGAGAAAAAGGCATCTATTGCCATCTGTGATAAGATGGGCTTAAAGGCTATCAAAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAGACGCATACAGAGACAAATCCGGACACATTTAACAAGGAAAGAGTTCATTACCCTGAGAAATGCCACAATTCATATCCAGAAATTTGGAGAGACACAATGGAGAAGAGTCCAAGCTCTTTCTGATTACAAACAACAGAAGAAGGCAACTATTATACTTCAGTGTCTCTGGAGAGCTAGAGTGGCACGAAAAGAGCTCAGAAAGCTTCGGATG 2049 0.4134 MGLRRKGGKGTPVNIIVGSQVWVEDPEIAWIDGEVTQINGTNATIITTDGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLAIRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQISEPERNYHCFYMLCSAPPEDVKKYKLGDPRQFHYLNQSSCYEVSNVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNINFVKGSEVDSSKLKDDKSLFHLRTVAELFMIVDKINNSIGQDSNAHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSSLNFLEQISQLTTMLEISFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKFWQPGIFENFNVLNQLRCGDSCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKAIKAGQMAELDARRAEVLAKAARRIQRQIRTHLTRKEFITLRNATIHIQKFGETQWRRVQALSDYKQQKKATIILQCLWRARVARKELRKLRM 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi938g00009 683 Gene3D - 373 528 - -
Sebi938g00009 683 ProSiteProfiles IQ motif profile. 608 635 IPR000048 GO:0005515
Sebi938g00009 683 PANTHER MYOSIN 62 371 - -
Sebi938g00009 683 Gene3D - 549 646 - -
Sebi938g00009 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 683 IPR027417 -
Sebi938g00009 683 ProSiteProfiles IQ motif profile. 658 683 IPR000048 GO:0005515
Sebi938g00009 683 SMART MYSc_2a 64 606 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 Gene3D Myosin VI head, motor domain, U50 subdomain 320 370 - -
Sebi938g00009 683 FunFam Myosin heavy chain 260 315 - -
Sebi938g00009 683 Pfam Myosin head (motor domain) 372 516 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 Pfam Myosin head (motor domain) 72 368 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 SMART iq_5 607 629 IPR000048 GO:0005515
Sebi938g00009 683 SMART iq_5 657 679 IPR000048 GO:0005515
Sebi938g00009 683 Gene3D - 647 683 - -
Sebi938g00009 683 Pfam IQ calmodulin-binding motif 610 628 IPR000048 GO:0005515
Sebi938g00009 683 Pfam IQ calmodulin-binding motif 660 679 IPR000048 GO:0005515
Sebi938g00009 683 Pfam Myosin N-terminal SH3-like domain 18 55 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 Gene3D - 260 318 - -
Sebi938g00009 683 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi938g00009 683 Gene3D Kinesin motor domain 73 259 IPR036961 -
Sebi938g00009 683 ProSiteProfiles Myosin motor domain profile. 70 525 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi938g00009 Sebi-Chr938 177221 183525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi938g00009 10 679 Myosins gene family AT1G08730 58.162 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi938g00009 K10357 - gmx:100817933 1097.03