Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi937g00001 GAATGGAGTGATGGCTTGATTGGAAGCAAAGGAAGTGGCGCCAGAGCGCCGCTGCGATGGGGAGAGAACAACAACCAGAGGCGGCGGCTTGAGAGTCTTGAACGGAACCTAATAGAGGAATTAGTTATTAATTCAGAGAGTCCAAGACTGAGTCTACAAGAGGTAGGAGCTGAGTTTATAGGGACATTCATTCTCATATTTGCTGGGACAGCAATCGCTATTGTGAACCAAAAGACACAAGCCTCTGAGACTCTGATTGGATGTGCTGACTCTACTGGTCTTGCTGTTATGATTGTCATCCTCTCCACTAGCCACATCTTCTATGCTAATCTTAACCCTGTCGTTTGA 348 0.4655 EWSDGLIGSKGSGARAPLRWGENNNQRRRLESLERNLIEELVINSESPRLSLQEVGAEFIGTFILIFAGTAIAIVNQKTQASETLIGCADSTGLAVMIVILSTSHIFYANLNPVV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi937g00001 115 SUPERFAMILY Aquaporin-like 53 115 IPR023271 -
Sebi937g00001 115 Gene3D Glycerol uptake facilitator protein. 15 115 IPR023271 -
Sebi937g00001 115 MobiDBLite consensus disorder prediction 1 20 - -
Sebi937g00001 115 PRINTS Major intrinsic protein family signature 53 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi937g00001 115 PRINTS Major intrinsic protein family signature 92 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi937g00001 115 PANTHER AQUAPORIN NIP2-1 36 115 IPR034294 -
Sebi937g00001 115 Pfam Major intrinsic protein 51 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi937g00001 Sebi-Chr937 34064 35308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi937g00001 32 115 Major Intrinsic Protein MIP AT1G80760 61.176 1.81e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi937g00001 K09874 - atr:18447007 98.9821