Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi936g00002 ATGATCAACGTCCACTCTCGTCACACCATCGTCCCTTCTGAATCCACCCCCAATCAAAAACTCTATTCCTTATGCGAACAAATCAAGCTTCGCACTCACGCTCCTCTCATCTACGTGTATAACAACCCACATGACCAACACAGTGCATCAACCTTCCTTCAGACCCTAACAAACTCCCTTAGCCAAGCTTTGGTTATTTACTATCCACTCGCGGGAAGGTTGAGTTCGATCGAAGGAGCGCGATGGGAACTCAATTGCAACGCCAAGGGAGCACATCTATTAGAAGCCAAATCCGAAGAAATAACCTTAGATGAGTTGGGCGATTTTGTTCCTACCAACTTGGTTCCCCAACTTATACCCAAAATCGATTATACTGTTCCCATTGAAGAGATGCCTCTGCTGTCTGTGCAACTAACCAGGTTCCGTTGTGGTGGTTATACCATGGGCGTGGCCTTATGTCGCGCCGCAATTGACGGAACCTCAGCCATGCGTTTCATGAACGTGTGGGCGAAGCTAGCGCGTGGGGAGCGTTTAGACCCAACAGAAACGCCATGTCACGATCGAACTGCGCTAGATTCACGCAAGCGGTTGCATTCACACAACCATTCAGAGTTTCACGCGCCTCCTGTTTGGTTAGGTGGTTTGGGAGAAACAGAGGAAGTGGTTGCAGTTGTGAAACTCACTGGAGAACAAGTTACAAAGCTTAAGAAGAAGGCTGGTAATACTGCAGCACAAACAAGACCTTATTCAACTTTTGAGGTTATTTCAGGGCACCTTTGGAGGTGTATAAGCAAAGCACGCTATTCAGGAAACGGTTACCAACCTACGACATTGTCAACATTGGTTAATTGTAGGAACCGTTTGAGGCCACCACTTCCTAGCAGTTATGCTGGGAATGCAGCATTTCCTACGGTGACAGAAACATGCTCTTTTGATGAAATTATGCATAGGCCTTTGAGTTATGCAGTTGAGAATGTTAGGAAAGCACTTGAGAGGGTGACACGGGAGTTTGTGATGTCAGCGCTTGATTACATAGATAGGGAGAAGGACATGGAATTGTTGAGGTATAATTTTCACTATCCTGCGCCAAGTGTGCATCAAGGACCGTTCAAAGGGAACCCAAACCTTTTTGTTGTGAGTTGGATGAATTTTTCGTTTAAGGATGCTGATTTTGGGTGGGGGAAGCCTGTTTATTTTGGGCCAGGGTACATGGATTCCGAAGGAAAGGCCTTCCTTCTGAATAATGCTAATGGTGATGGCGTTGTTGTGGCGATTTCTTTGGACGTGTCTCACATGGATGCCTTCAGGAAATTTTTTTACGGTGATATTGAAGAGGTATTTCCCGCTTCCAAACTGTGA 1359 0.4606 MINVHSRHTIVPSESTPNQKLYSLCEQIKLRTHAPLIYVYNNPHDQHSASTFLQTLTNSLSQALVIYYPLAGRLSSIEGARWELNCNAKGAHLLEAKSEEITLDELGDFVPTNLVPQLIPKIDYTVPIEEMPLLSVQLTRFRCGGYTMGVALCRAAIDGTSAMRFMNVWAKLARGERLDPTETPCHDRTALDSRKRLHSHNHSEFHAPPVWLGGLGETEEVVAVVKLTGEQVTKLKKKAGNTAAQTRPYSTFEVISGHLWRCISKARYSGNGYQPTTLSTLVNCRNRLRPPLPSSYAGNAAFPTVTETCSFDEIMHRPLSYAVENVRKALERVTREFVMSALDYIDREKDMELLRYNFHYPAPSVHQGPFKGNPNLFVVSWMNFSFKDADFGWGKPVYFGPGYMDSEGKAFLLNNANGDGVVVAISLDVSHMDAFRKFFYGDIEEVFPASKL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi936g00002 452 Gene3D - 1 207 IPR023213 -
Sebi936g00002 452 Gene3D - 217 441 IPR023213 -
Sebi936g00002 452 Pfam Transferase family 2 439 - -
Sebi936g00002 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi936g00002 Sebi-Chr936 110389 111747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi936g00002 2 440 Monolignol Biosynthesis Gene Families AT5G48930 36.062 4.67e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi936g00002 K13065 - gmx:100775549 647.506