Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi936g00001 ATGGCCTCTGAGAGAACCAACTTCAATGAGGATACCAAGAAACCCCTTTGTGCTTGTGAGGAATCCAAGGCTGAACCTGGCAGAAGCAGAGGAAGGAAGACCAATGTGAAGGGTCCTAAGAAAGCACCACAGAGAGGCTTGGGTGTGGAAAAGTTGGAGAGGTTGAGGATTCAAAAGTCTTGGAAAAAGATGGATGAAGCATCTGGAGTTCCAACCCTCCAATATTTGGCAGTGGAATGCCCTCATCAACAAGTGATGATGAGTGGTACTGTTCCTTTCATTGGGAACAAGGGTGGGATGAATGTGCTTGGTGGGGTTGGTTCTAATGTTGCTGCAGGGTGGCTTATGCCTAATCAGGTTAACAGGGTGGGTCTCTATGGATCTGGACCTTCACTTTTGGGTCCTTTTGTTGGAACCCCTCTTGAGACCTCGAAAGAGCTCTCTTCAATGACAAATGTGCATTATTCTCAACCTGAATGTCTTGATCTTTGCCTTAAGGTATTTTAG 507 0.4615 MASERTNFNEDTKKPLCACEESKAEPGRSRGRKTNVKGPKKAPQRGLGVEKLERLRIQKSWKKMDEASGVPTLQYLAVECPHQQVMMSGTVPFIGNKGGMNVLGGVGSNVAAGWLMPNQVNRVGLYGSGPSLLGPFVGTPLETSKELSSMTNVHYSQPECLDLCLKVF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi936g00001 168 MobiDBLite consensus disorder prediction 7 32 - -
Sebi936g00001 168 Pfam Plant transcription factor NOZZLE 20 154 IPR014855 GO:0003700
Sebi936g00001 168 PANTHER OS01G0212500 PROTEIN 1 165 IPR040356 GO:0003700
Sebi936g00001 168 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi936g00001 Sebi-Chr936 52193 52755 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Sebi936g00001 NOZZLE 5.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi936g00001 - - lang:109348179 122.094