Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi935g00016 ATGGCGGAATTGGGTAGGAGAAGAATGAGGGGTGAAAAGAGGAAAAAGCTGCATCTTAGTAAGATCTACTCATTTGCATGTGGGAAGTCATCTTTCAAAGGAGATCATTCACAGATTGGGGGACGTGGCTATTCCAGGTTGGTGTTTTGCAATGAACCAGATAACTTTGAGGCAGGGATTAGGAATTATGCAGATAATTCTGTCAGGTCCACAAAGTATACTCCTGCTACTTTCTTGCCAAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCTAATTTTTATTTTTTGGTTACTGGTATATTGGCCTTCACAAAGCTTGCTCCTTATACAGCTGTCACTGCTATCCTTCCTCTGACTATCGTTATTGGGGCAACTATGGTCAAAGAGGGTATTGAAGATTGGCGTCGCAAAAAGCAGAGTGCCTATGAACTCTATTTTGGGCAACTTGTCCCTGGCTTGAAGAATATCACTAATTTTAACAAGGAAATTGTGGTTTTCTTGCAAGCTAGTGGAATACTGCCGCAGGATATGGAGGTGAACAATAGAAGAGTTAAAGTGCACAAAGGACATGGAACTTTCGAGTATACTGAGTGGAAGAATCTGAGGGTGGGGCATATAGTAAAGGTAATGAAGGATGAATTTTTCCCTGCTGACCTCCTACTTCTTTCATCCAGCTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACATGAGGATTTTGAGTTCAGTGATTTTAAGGCTACAATCAAATGTGAAGATCCAAATGCAAATTTATATTCATTTGTGGGGAGCATGGAGTTTGAAGAGCAACAACATCCCCTTTCTCCTCAGCAACTTCTTCTGAGAGACTCTAAACTTCAAAATACGGACTACATATTTGGAGCTGTTGTCTTCACTGGTCATGACACAAAGGTTATTCAAAATTCTACTGATCCCCCTTCAAAGAGAAGCAAAATTGAGAGGAAGATGGACAAAATTATCTACTTCTTGTTTTGCATTTTATTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAAAGATGATTTGGATGATGGGGTGATGAAAAGATGGTATTTAAGACCAGATGATTCTAAAATTTTCTTTGATCCTAAAAGAGCACCTGCTGCTGCTATATTTCATAGTTTGACAGCCTTAATGTTATATGGCTTCTTCATTCCCATCTCATTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAAAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAAGCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAATTCAATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCATATGGCCGTGGTGTTACAGAGGTTGAGATGGCCATGGATAGGAAAAATGGTTCTCCTTTGATCAATGATATCAGGGAATCTCCTGATAGAAATACACCCATCAAAGGTTTTAACTTTACAGATGAAAGGATCATGAATGGAAACTGGGTTAATGAGTCTCATGTAGATGTTATCCAGAATTTTTTTCGCTTATTGGCAATCTGTCATACAGCCATTCCAGAAGTGGATGAAGGCACAGGCAATGTCTCATATGAGGCTGAGTCTCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCGATGTATGAATTGGATCCAGTTTCTGGTGACAAAGTTGAAAGGATATACAAACTTCTAAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTAATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTCGGAACATGTACATGAATATGCTGATGCAGGTCTAAGAACCCTGATACTTGCGTATCGTGAAATTGATGAAGAACAATACAAGGAGTTTGATAAGAAATTATCTCAAGCAAAAAATTCAGTTAGTGCAGATCAGGAAACAATGATTGAGGAAGTATCAGATAAGATTGAGAGAAATCTAATCCTTCTCGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTGCACAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGCTTTGCTTGTAGCTTGCTTAGACAAGGAATGAAGCAGCTTATAATTCATTTGGAGACTCCAGAAATTCAAGCATTGGAGAAGGGTGGAGACAAGTCGGCTATTTCCAAAGCTTCAAGGGAAAGTATCCGCCGTCAGATATCTGAAGCTGCTCAACAGGTTACTTCCTCCAGAGGAACCTCTCAGAAAGCATTTGCTCTAATTATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATATTAAGGGCATGTTTCTAGAGCTTGCAATTCGTTGTGCATCAGTTATCTGTTGCCGCTCATCACCTAAGCAGAAAGCACTGGTCACTAGGCTGGTCAAATCTGGAACTGGTAAAACTACATTAGCTATTGGAGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACAGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATATCACTTTTGGCTTTACTCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTGTATAATGTCTTCTTTTCATCACTTCCCGTGATTGCCCTTGGGGTCTTTGACCAGGATGTATCTGCTCGATACTGTCAGAAATTTCCTATGTTATATCAAGAAGGTGTACAAAATATCCTCTTTAGCTGGCGTCGAATACTCGGCTGGATGCTTAATGGATTTATCAGTGCCATAATAATATTCTTCTTCTGCACAAAGGCAATGGAGATTCAGGCCTTTGATGAGGAAGGAAGAACTGCTGGAAGGGATATACTGGGAGCAACAATGTATACATGTGTGGTTTGGGTTGTAAACTTGCAGATGGCACTTGCTATAAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGGACCATTGCTTTCTGGTATCTTTTCCTCATAGTGTATGGAGCAATAACTCCAAGCTTTTCTACAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCATCTCCTTCCTTTTGGATTGTGACATTGTTTGTGGTGGTCTCAACACTCATACCATACTTCTCTTACTCAGCACTGCAAATGAGGTTCTTTCCTATGTATCATGAAATGGTTCAATGGATAAGGTATGAGGGGAAGGCAAATGATCCTGAAATCATTGAATTGGTGAGGCAGGGGTCATTGAGGCCAACAACTGTGGGTTCAACAGCTCGTTTAGCAGCTAAGACTAACCACATTAGAGAGAATTCTACTAACCATAGATAA 3705 0.3992 MAELGRRRMRGEKRKKLHLSKIYSFACGKSSFKGDHSQIGGRGYSRLVFCNEPDNFEAGIRNYADNSVRSTKYTPATFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVTAILPLTIVIGATMVKEGIEDWRRKKQSAYELYFGQLVPGLKNITNFNKEIVVFLQASGILPQDMEVNNRRVKVHKGHGTFEYTEWKNLRVGHIVKVMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLHEDFEFSDFKATIKCEDPNANLYSFVGSMEFEEQQHPLSPQQLLLRDSKLQNTDYIFGAVVFTGHDTKVIQNSTDPPSKRSKIERKMDKIIYFLFCILFLMAFVGSIFFGIATKDDLDDGVMKRWYLRPDDSKIFFDPKRAPAAAIFHSLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEMAMDRKNGSPLINDIRESPDRNTPIKGFNFTDERIMNGNWVNESHVDVIQNFFRLLAICHTAIPEVDEGTGNVSYEAESPDEAAFVIAAREIGFEFYKRTQTSLSMYELDPVSGDKVERIYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREFEEKTSEHVHEYADAGLRTLILAYREIDEEQYKEFDKKLSQAKNSVSADQETMIEEVSDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQLIIHLETPEIQALEKGGDKSAISKASRESIRRQISEAAQQVTSSRGTSQKAFALIIDGKSLTYALEDNIKGMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCQKFPMLYQEGVQNILFSWRRILGWMLNGFISAIIIFFFCTKAMEIQAFDEEGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHIFIWGTIAFWYLFLIVYGAITPSFSTNAYKVFIETLAPSPSFWIVTLFVVVSTLIPYFSYSALQMRFFPMYHEMVQWIRYEGKANDPEIIELVRQGSLRPTTVGSTARLAAKTNHIRENSTNHR 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi935g00016 1234 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1179 IPR023298 -
Sebi935g00016 1234 SUPERFAMILY HAD-like 463 956 IPR036412 -
Sebi935g00016 1234 Pfam Cation transport ATPase (P-type) 573 662 - -
Sebi935g00016 1234 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 1190 - -
Sebi935g00016 1234 FunFam Phospholipid-transporting ATPase 736 941 - -
Sebi935g00016 1234 FunFam Phospholipid-transporting ATPase 166 330 - -
Sebi935g00016 1234 Coils Coil 693 713 - -
Sebi935g00016 1234 SFLD C1.7: P-type atpase like 450 952 - -
Sebi935g00016 1234 ProSitePatterns E1-E2 ATPases phosphorylation site. 470 476 IPR018303 -
Sebi935g00016 1234 NCBIfam phospholipid-translocating P-type ATPase 175 1186 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi935g00016 1234 Gene3D - 737 941 IPR023214 -
Sebi935g00016 1234 SUPERFAMILY Calcium ATPase, transduction domain A 185 327 IPR008250 -
Sebi935g00016 1234 Pfam Phospholipid-translocating ATPase N-terminal 49 115 IPR032631 -
Sebi935g00016 1234 Gene3D - 154 330 - -
Sebi935g00016 1234 CDD P-type_ATPase_APLT_Dnf-like 65 1050 - -
Sebi935g00016 1234 Pfam Phospholipid-translocating P-type ATPase C-terminal 929 1179 IPR032630 -
Sebi935g00016 1234 SFLD p-type atpase 450 952 IPR044492 -
Sebi935g00016 1234 PRINTS P-type cation-transporting ATPase superfamily signature 901 920 - -
Sebi935g00016 1234 PRINTS P-type cation-transporting ATPase superfamily signature 468 482 - -
Sebi935g00016 1234 Gene3D - 581 736 IPR023299 GO:0000166
Sebi935g00016 1234 FunFam Phospholipid-transporting ATPase 578 736 - -
Sebi935g00016 1234 NCBIfam HAD-IC family P-type ATPase 872 983 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi935g00016 1234 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 535 738 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi935g00016 Sebi-Chr935 145785 152429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi935g00016 17 1227 Primary Pumps ATPases AT1G68710 72.975 0.0 1909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi935g00016 K01530 - gmx:100785037 2146.32