Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi934g00011 ATGTATGAATTCTCAAAGGCATATTCTCTCCTTAATGCAGGAGAAGCTAAGGGTGTTCAACCAAGCGATTACGTTGTACCTGACGATGTTAAAGCAGCAGGTTTTCAAATCTGTGCTGATGAATTGGGGTCTATTGTTGAAGGCCACGATGTAAAGAAGCTCAAGTTTCATGGTGGAGTTAATGGTATTGCAGAAAAGCTTTCCACATCAACCACTAAGGGGCTTAGTGGTGATTCTGATGCCCGGCATAGGAGACAAGAGATTTTTGGAGTCAATAAATTTGCTGAAAGTGAAGTTCGGAGTTTCTGGGTTTTTGTTTATGAAGCCCTTCAAGACATGACTCTCATGATACTTGGTGTGTGTGCAGTTGTGTCTCTGATAGTTGGCGTAGCAACAGAAGGATGGCCCAAAGGGGCTCATGATGGTCTTGGAATTGTTGCAAGTATCCTATTGGTTGTCTTTGTAACAGCAACAAGTGATTATCGCCAATCATTACAATTCAAGGATTTAGACAAGGAGAAGAAAAAGATTTCCATTCAGGTAACAAGAAATGGTTATAGGCAGAAACTGTCAATCTACCATTTACTTCCTGGTGATCTTGTGCATCTTTCCATTGGAGACCAAGTCCCTGCAGATGGGTTATTTGTTTCTGGATTTTCTGTGTTGATTGATGAGTCAAGTTTAACTGGTGAGAGTGAGCCAGTGATGGTAACTTCCCAAAATCCATTTCTTCTCTCTGGAACCAAGGTCCAAGATGGATCATGCACAATGTTGGTTGCAACTGTTGGGATGAGAACTCAATGGG 805 0.4174 MYEFSKAYSLLNAGEAKGVQPSDYVVPDDVKAAGFQICADELGSIVEGHDVKKLKFHGGVNGIAEKLSTSTTKGLSGDSDARHRRQEIFGVNKFAESEVRSFWVFVYEALQDMTLMILGVCAVVSLIVGVATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKLSIYHLLPGDLVHLSIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMLVATVGMRTQW 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi934g00011 268 PANTHER CATION TRANSPORTING ATPASE 34 268 - -
Sebi934g00011 268 Pfam Cation transporter/ATPase, N-terminus 57 125 IPR004014 -
Sebi934g00011 268 Gene3D - 108 163 - -
Sebi934g00011 268 SMART Cation_ATPase_N_a_2 55 130 IPR004014 -
Sebi934g00011 268 Pfam E1-E2 ATPase 177 267 - -
Sebi934g00011 268 SUPERFAMILY Calcium ATPase, transduction domain A 179 267 IPR008250 -
Sebi934g00011 268 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 179 IPR023298 -
Sebi934g00011 268 FunFam Calcium-transporting ATPase 156 268 - -
Sebi934g00011 268 Gene3D - 79 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi934g00011 Sebi-Chr934 201002 201928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi934g00011 18 268 Primary Pumps ATPases AT4G37640 82.072 8.33e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi934g00011 K01537 - gmx:100776926 473.396