Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi934g00005 ATGAAAGCTTATCATCATTTCAGCTTCTTTTTAATCCTATCATTGTCTCTCTTCACTGCAAAAGGGGGTCAACACCACAATTCAATTCAATCAATCCCACACAAGAAGGCTCCTCCACCAGCCCTTGTTTCCGGTGGGTTCCGCTCCGCCGCCGGTAACCCCTCCGCCACCGCCGGCAACCCCCTTCATCCCCCGACATTCCTTTCTTCAACGAGTATCCATCAGGGCCGCCGCCACCGGAGCAGAGCCAACCACCGCCTTCAGCCACAATCGCTAACCCGACGGCGACGAAACCCACTAAGCCGACGAAGAATGTGGCAATTGCGGGTTGTCCGTGGCAATTGCGACGCTGGGAATGTTCTTCGCACTCGCGTTCTTCTTATTCGCCAAGGGCCCCCACCTCCACCTTCAAGCTTCCTCTACATTGGGACGGTGGAGCCCACAAGAACGTCGGTGAGCGAACCAAATCACTCACCTTATCGTAAGCTCAATTCCGTTAAGCTCAGTTCCGATCATCTTTACCGGCCAAGCCCTGAGTTGCAGCCGTTGCCGCACTACAGCAGGCCCCCCCGACGAGATCCGCTCGACGCCGGCGGCGTCAAACGTCGTCTTCCTCCGACGAGGAAAGCCGAGAAACGGCGTTTCATTCGCCGCATGGCTCGTCGCTCAGCCACGATGACAGCTATTACACGCCGGTTTCGCGTCACAGTTCTCTGGCTAACGGTAGCCCCCGCCGCGCCGGTCGCCGTAGCTCCGGTGGTTCCTTTCTCGAAGAGAACCTCTCCGAAATCTAGGTTTTCTGGTCCGTCGCCGGATGTAAGGCCAGCCATCATTCCCTCTATAAAGAGTTATGCTCTGCCGCCGCAGGCGGCGGCGGACGGCGGTGCCTCCAGAAGGCCGAAATTTTCATCGCCTCCCCCAGCACCGAATTTGAAGAGTCTTCATTCAAACGGTATCGTCTTCCTCTGTGTCAAGAAATCAGAAACAGCAACAATCTTTGTCTCCAATGAAGAAGCAGCTTCTGTTAACAGTGTGAGTAAAGGTTCAGAGGAAGGTGATGAAATGGATGGAGGGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACCTCAGACCGTGCCACTGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTGGCTGCAACTCTGCAAATTCTGCCCCTAAAGAGACAACTGTTACTAGAAAACCAGGCACTGAATGTGACAAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTGGTAAAGATGGCTCCAACAAAGGAGGAAGAGATAAAACTAAAAAATTATGATGGTGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAATCAGTGCTTGATATTCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTGTATAGAGCTAATTTTGAAGCAGAAGTTAACTACCTCAGGAAATCCTTTCAGACCTTGGAGGCAGCAAGTGAGGAATTGAAGAACAGCAGGCTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGATGGCACCAATCGTGGTGATGCTAAATCATTCAAACTGGAGACACTCCTGAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTATAGGAGGTGATTCTACAAATGAGAATGTTCAAAACCAAACAAATTCTCAATTCAATGAGGATGAATTCAGAAAGAAAGGACTGCAGGTTGTGGCTGGACTGAGTCGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGATTCAGATGTCTTAAGCAGCTACGTCTCAAAGCTTGAAACGGGGCTTGATAAAGTGACATTGGTTTTGCAATATGAAAAACCAGATATGCAAGGAAACTTCTTTAACTCTACAAAGCTATTTCTAAAAGAAGCTGAAGAGAAGATTATTGGGATCAAGGCTGATGAGAGAAGGGCCTTATTCCTTGTGAAAGATGTTACAGAATACTTTCATGGGGATACAGCTAAGGAAGAAGCACACCCTTTCAGAATTTTCATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTCTGCAAAGAAGTGGGAAGGATGCAGGATAGAACTGTGATTGGTTCAACCAGATCCTTCAGAATAGCAGCAAGTGCATCCTTACCTGTTCTCAACAGGTACCATGCAAGACAAAATAGAAGTTCAGATGAGGAAAGCTTATCCCCATAG 2334 0.4777 MKAYHHFSFFLILSLSLFTAKGGQHHNSIQSIPHKKAPPPALVSGGFRSAAGNPSATAGNPLHPPTFLSSTSIHQGRRHRSRANHRLQPQSLTRRRRNPLSRRRMWQLRVVRGNCDAGNVLRTRVLLIRQGPPPPPSSFLYIGTVEPTRTSVSEPNHSPYRKLNSVKLSSDHLYRPSPELQPLPHYSRPPRRDPLDAGGVKRRLPPTRKAEKRRFIRRMARRSATMTAITRRFRVTVLWLTVAPAAPVAVAPVVPFSKRTSPKSRFSGPSPDVRPAIIPSIKSYALPPQAAADGGASRRPKFSSPPPAPNLKSLHSNGIVFLCVKKSETATIFVSNEEAASVNSVSKGSEEGDEMDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLLAATLQILPLKRQLLLENQALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKSVLDIPLAFKRVEAMLYRANFEAEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNDGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGIGGDSTNENVQNQTNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLETGLDKVTLVLQYEKPDMQGNFFNSTKLFLKEAEEKIIGIKADERRALFLVKDVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSTRSFRIAASASLPVLNRYHARQNRSSDEESLSP 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi934g00005 777 SUPERFAMILY Formin homology 2 domain (FH2 domain) 365 738 - -
Sebi934g00005 777 Gene3D Formin, FH2 domain 359 746 IPR042201 -
Sebi934g00005 777 MobiDBLite consensus disorder prediction 50 74 - -
Sebi934g00005 777 ProSiteProfiles Formin homology-2 (FH2) domain profile. 337 752 IPR015425 -
Sebi934g00005 777 MobiDBLite consensus disorder prediction 28 100 - -
Sebi934g00005 777 MobiDBLite consensus disorder prediction 75 100 - -
Sebi934g00005 777 Pfam Formin Homology 2 Domain 358 399 IPR015425 -
Sebi934g00005 777 Pfam Formin Homology 2 Domain 418 726 IPR015425 -
Sebi934g00005 777 PANTHER FORMIN-RELATED 9 771 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sebi934g00005 777 MobiDBLite consensus disorder prediction 189 205 - -
Sebi934g00005 777 MobiDBLite consensus disorder prediction 172 211 - -
Sebi934g00005 777 MobiDBLite consensus disorder prediction 288 310 - -
Sebi934g00005 777 SMART it6_source 352 741 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi934g00005 Sebi-Chr934 131891 136045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi934g00005 342 767 FH2 protein (formin) Gene Family AT5G67470 68.132 0.0 571