Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi933g00020 ATGCCTTGTTCACTCCTCTCTCATCTCCCTCTCTCTTCCCTCCCTACAAAGCCACTCGTTTCCCTGTCACTCCAAAATCTTATCCACTTCACCGTCTCTCCGTCCCTCACCACAGGAAAAGACGATTCTGGCATTCCTGTAGCAAGTGCCAAGCTTGATGATGTTTCTGATCTTCTGGGTGGTGCCCTTTTTCTTCCTTTGTTCAAATGGATGAAAGAGTATGGCCCCATTTACCGTCTAGCTGCTGGCCCCAGAAACTTTGTTGTGGTTAGTGACCCCGCCATTGCCAAGCATGTGCTCAAGAATTATGGAAAATATGCCAAGGGTCTCGTTGCTGAGGTCTCAGAGTTCCTTTTTGGTTCCGGTTTTGCAATTGCTGAAGGTCCACTCTGGACGATAATCCCGAGACAAATAAAGGCTGAAAAGGCTGTTAGTGTTATCAGGAAAACTGTTGAAGATCTTATTGAAAAATGTAAAGAGATTGTAGAATCTGAGGGTGAAAGGATTGATGTTGATGAATATGTGAATGACACTGATCCTAGTATCCTCCGGTTCTTGCTCGCCAGCAGAGAAGAGGTTTCCAGTGCACAATTAAGAGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACCGGTTCGGTGCTGACCTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAAAGTTTTACAGGGAAGGCGTCCTGCCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCATCCGGCTCTATCCACACCCCCCTAAGAGCTCAAGTTCCTGATGAGCTCCCTGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACACCATTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTGTGCCAGAAAGATTTGATTTGGATGGTCCAATGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGGCCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTTGAGTTGGTTCCTGATCAGAATATTAGTATGACTACAGGAGCAACAATACATACAACAAAT 1161 0.4367 MPCSLLSHLPLSSLPTKPLVSLSLQNLIHFTVSPSLTTGKDDSGIPVASAKLDDVSDLLGGALFLPLFKWMKEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTIIPRQIKAEKAVSVIRKTVEDLIEKCKEIVESEGERIDVDEYVNDTDPSILRFLLASREEVSSAQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDKVLQGRRPAYEDIKDLKFLTRCIIESSGSIHTPLRAQVPDELPGAYKVNAGQDIMISVYNIHHSSEVWDRAEEFVPERFDLDGPMPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQNISMTTGATIHTTN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi933g00020 387 PANTHER CYTOCHROME P450 FAMILY 4 130 370 - -
Sebi933g00020 387 PRINTS P450 superfamily signature 208 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS P450 superfamily signature 335 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 SUPERFAMILY Cytochrome P450 59 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 Pfam Cytochrome P450 139 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 Pfam Cytochrome P450 67 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 337 346 IPR017972 GO:0005506|GO:0016705
Sebi933g00020 387 Gene3D Cytochrome P450 134 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS E-class P450 group I signature 296 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi933g00020 387 Gene3D Cytochrome P450 65 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi933g00020 Sebi-Chr933 219128 226028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi933g00020 130 387 Cytochrome P450 AT3G53130 79.771 3.72e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi933g00020 K09837 - gmx:100803324 453.366