Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi931g00015 ATGTCAACAAACCCCACTCAGCATGAAAACACTGTGAACCCACCCATTAAGAAGGACTGGCCTTATGATAGGCTATTGAAGGTTGGCCCTAGTAAATCGTTCACAGATCTATCCCCCAAAAACGTGAGGAACATCATTTTTGATGTATCAGATGAGGACGATGGAAACGAGATGGCCATAGAACCCCTTAGCAATAAAGTGGGTGTTATCGCGGGCAACAACACCCAATTCTCACCCAATGATGGAAAGTCAAACAAACAGGAAACTTCATCACAGAGGAAAGGACGAGCAACACGGAGCAAGGTTTCAAAATCTGAAGTTCCCAAACAAAGCGAATCAAAGGTCCTTGGGAAGAAGTTGTTTCAAACCCCATCTTCTAACTCCAATGGTAAAGGGTCCAAAAGGGCCAAAGCAAACAATGCTGATACTAATGCAGAAACTGAAAGTACAAAGTCACCGGAATTAAACCATGATGCAAATGGAGAAAGAACCATTAAGACTCCATCGTCCAATATATTACCAAAGACTATGCTTTCAAGGTTTCGTCCTTCAACAGACATGAAACTCACTGAAAGGGAAGTACATGTTGCTGCTTACATTTTTTCATATGATGGAGATGAGGACGAAATATTACTTAAGATTTCTGACCTAGTGGGTAGAAGAAAAGATTTTGTAACACTATGTCCAGATAGACTAGTGAACGATAAGATAATGACACTAGCTACAGTTAAGGGATCTTGGACACAAGCTAGGAAGACAAATAAGACAGTTTGGTACCTACCACCTGCCTTCACGGATGATGCTCTTGGAGGTTCAACAACAGATGACCTGATTTCAAAGTATGCTAGAGTATGGATGCAGCCCTATGCTGAACTGAAATATTGTGAGGCATTGACAAATATCATGAATTCGGAGGCATGTCCAGAAGACTTTCTTCATTCTGGTGTGCAACTTGACATGTGGGAGTTATTTGTCGCAAGAAATGTTACTAACGGAGGGACTATGGAAAATTCTTCTATATGGTTATTGGACTGGATGGAGAAGGAAAGTGCATTTCACACCAATCTAATACCATTGATAAACGAACGACACATTCGCATGCGTTGTGCACTCAATCTTGTCTGTGGAGAGCACAATGAAATCAATCAACTAGTTGATGATCAAGCACAAACATTTTGGACGACCCATATGAAGGCTGGAAGGACAACCCATCTCTTGGAGAACTCATCAAGCATGAACAGTACAACAAATGGAGGCAGCAGTGATGAAGACAATCTGATTGGGGTTCCTTTCATGGCAACTTGGCTACCATATCGGGACCCAGTAGGAAATGGATTTAATGTTGGTATTGAGGTTAGAGGCAGCAGACACTGCTTCACTAAGGGATTACCACAGATGAGGGCATTCTACCATGTTCACTACCCAGTGGTGATGTGGTACAAGTATCTTGGGAATGCTAAATTTAGCTTTAAGCTTTGGCCAACCGATGGACATGAGCAGATTGATTATCCAAACCATGCCTTAAATAATGCAGCTCATAATGTTGGTAGCAACAACTCAAGGACAGTGGACGACATTGATAACAAACATGTTCAAGGAGAAGGTGTTCAAGAAGAAGGTGTTCAAGGGGAAGCAGATGAAATAATGGGAGTTCAAGGTGAAGATCTCTGGATGACAACACTCACTCAAGCACAATTGGAAGGCAGGCGTGGAGTGGTTATACCACTGAGGGTTGTCAACAATCACTTCCACCACAAGCCACACGAATTTCAGGTAAGATTACCAAATGACCAGCTGAAAACATGGGGAATAATTTGGAGTAACCGAATACCAACTGAATGCAAAATTGGACAAGGATGGAGTGAATTTTGTAGCACCCATGGTCTGCGCAAAGGTGACCAAATCCGGTTTTGGAAATTGGATGGTGAATCCTCCGTTCGAATCGTTCTCACAAGATCATTATCCTAA 1968 0.4217 MSTNPTQHENTVNPPIKKDWPYDRLLKVGPSKSFTDLSPKNVRNIIFDVSDEDDGNEMAIEPLSNKVGVIAGNNTQFSPNDGKSNKQETSSQRKGRATRSKVSKSEVPKQSESKVLGKKLFQTPSSNSNGKGSKRAKANNADTNAETESTKSPELNHDANGERTIKTPSSNILPKTMLSRFRPSTDMKLTEREVHVAAYIFSYDGDEDEILLKISDLVGRRKDFVTLCPDRLVNDKIMTLATVKGSWTQARKTNKTVWYLPPAFTDDALGGSTTDDLISKYARVWMQPYAELKYCEALTNIMNSEACPEDFLHSGVQLDMWELFVARNVTNGGTMENSSIWLLDWMEKESAFHTNLIPLINERHIRMRCALNLVCGEHNEINQLVDDQAQTFWTTHMKAGRTTHLLENSSSMNSTTNGGSSDEDNLIGVPFMATWLPYRDPVGNGFNVGIEVRGSRHCFTKGLPQMRAFYHVHYPVVMWYKYLGNAKFSFKLWPTDGHEQIDYPNHALNNAAHNVGSNNSRTVDDIDNKHVQGEGVQEEGVQGEADEIMGVQGEDLWMTTLTQAQLEGRRGVVIPLRVVNNHFHHKPHEFQVRLPNDQLKTWGIIWSNRIPTECKIGQGWSEFCSTHGLRKGDQIRFWKLDGESSVRIVLTRSLS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi931g00015 655 Pfam B3 DNA binding domain 557 644 IPR003340 GO:0003677
Sebi931g00015 655 MobiDBLite consensus disorder prediction 1 20 - -
Sebi931g00015 655 MobiDBLite consensus disorder prediction 87 113 - -
Sebi931g00015 655 Gene3D - 539 652 IPR015300 -
Sebi931g00015 655 CDD B3_DNA 558 650 IPR003340 GO:0003677
Sebi931g00015 655 MobiDBLite consensus disorder prediction 70 86 - -
Sebi931g00015 655 ProSiteProfiles B3 DNA-binding domain profile. 557 654 IPR003340 GO:0003677
Sebi931g00015 655 MobiDBLite consensus disorder prediction 116 150 - -
Sebi931g00015 655 SUPERFAMILY DNA-binding pseudobarrel domain 557 643 IPR015300 -
Sebi931g00015 655 MobiDBLite consensus disorder prediction 70 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi931g00015 Sebi-Chr931 248923 253199 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi931g00015 B3 7.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi931g00015 - K13738 lja:Lj0g3v0303209.1 139.813