Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi930g00009 ATGGCGATTCAAGGTCAAAATGGATTTACTAGATCACAGGGTGGTCTTCCAGTTGGAAATGGAGCATCCTTAAATTCTGGGTTGCATTCTGTTGCACGTATTCAAAAACTGAATGATCAGTTTTCTTGTGGAAATGACTATGCCTTGAAGGTAAGGAAACCTTATACTATCACCAAGCAGAGAGAAAGATGGACAGATGAAGAACATAAGAAATTCCTTGAAGCTTTAAAGCTGTATGGCCGAGCCTGGCGACGGATTGAAGAACATGTTGGCACAAAGACAGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTACTAAGATTCTTAGAGACTCTAGTGGGAATAGTACAACCTCTGTGGAATCAATTGAAATTCCACCTCCACGTCCAAAGAGAAAGCCAAATCATCCTTACCCGCGTAAACTAGTAGAGATCCCAAATAATGAATTTTCCATCTCAGAACAGCCACTGAGGTCTAATTCTCTTAAGTCATCAGATTTTGGTCAAGAAAACAAATCTCCCAAATCAGTATTATCTGCAGTTATTTCAGAAACCCTTGGATCCTCAGATTCCGATACTCCAACTGGAAGTTTGTCCCCAGTTTCATCCATCAGTGCTGTCAATACCAGAAGCTTTCCACTAATTGAACCCAAAACATCATCTGAGGAAGATGGTTCTCCACCCCAAAATGGACTAATTGCTGGTTCAGCTCATGATATGGAACCTCTTGTGGATGTGAAACTCGAGCTTTTCTCTAAGGAAAGTGCTTCTACAAAAGATGATGCAGCAGAAGAATCATCTGGTAGAACTCTCAAACTTTTTGGAACAACTTTGCTGGTAACAGATCCCTGCAGACCATCTTCTCCTCCAACAATGGAGACATGTAAACCAATACCTTCTACCATGTATCTTATGCAACAACTTCAGAGTGGATGTTCAGACATTGCAACTATTGTTCCTTGGTGGACTCTTTCCCACAATGCACCATCCATGCCACTGCACAAGGAGTCTGAGGGGAAACATCTATATTCTAACCATGGAGAATGTGAAGATAAGGAAGTTCAAAAGGAAGGATCTTGGACTGGTTCCAACACTAGTTCAATTAATGATGGAGAGAGCAATGAAAGATCATCATATGATCAAGCAAAAAGCACTCATGTGCATTCCCTTATAGGAAACACTAGACCAAGTGAAACATCAGCTATATCTGAGCTAAGGGTGAGGCCTAAAACCTGTGGGAAAGGTTTTGTACCATATAAAAGGTGTTTGGCAGAGAGAGAAAACCAGTGCTCACCAAATGAGGAGAGGGAAGAGCAACGTATCAGGCTTTCCTTATAG 1341 0.4131 MAIQGQNGFTRSQGGLPVGNGASLNSGLHSVARIQKLNDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKILRDSSGNSTTSVESIEIPPPRPKRKPNHPYPRKLVEIPNNEFSISEQPLRSNSLKSSDFGQENKSPKSVLSAVISETLGSSDSDTPTGSLSPVSSISAVNTRSFPLIEPKTSSEEDGSPPQNGLIAGSAHDMEPLVDVKLELFSKESASTKDDAAEESSGRTLKLFGTTLLVTDPCRPSSPPTMETCKPIPSTMYLMQQLQSGCSDIATIVPWWTLSHNAPSMPLHKESEGKHLYSNHGECEDKEVQKEGSWTGSNTSSINDGESNERSSYDQAKSTHVHSLIGNTRPSETSAISELRVRPKTCGKGFVPYKRCLAERENQCSPNEEREEQRIRLSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi930g00009 446 PANTHER SWI/SNF COMPLEX-RELATED 44 372 - -
Sebi930g00009 446 SMART sant 60 108 IPR001005 -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 149 177 - -
Sebi930g00009 446 FunFam protein REVEILLE 6 isoform X1 63 111 - -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 349 403 - -
Sebi930g00009 446 SUPERFAMILY Homeodomain-like 55 109 IPR009057 -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 217 236 - -
Sebi930g00009 446 ProSiteProfiles SANT domain profile. 59 110 IPR017884 -
Sebi930g00009 446 Pfam Myb-like DNA-binding domain 61 104 IPR001005 -
Sebi930g00009 446 Gene3D - 63 109 - -
Sebi930g00009 446 CDD SANT 63 106 IPR001005 -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 384 402 - -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 359 376 - -
Sebi930g00009 446 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
Sebi930g00009 446 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Sebi930g00009 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Sebi930g00009 446 MobiDBLite consensus disorder prediction 113 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi930g00009 Sebi-Chr930 84511 87080 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi930g00009 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi930g00009 - - gmx:778060 626.32