Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi930g00006 ATGTCAAAGGGAGACAAGGTTAATGTTTTGGACTTTTGGGCTAGCCCATATTGTGCTAGAGTGAAAATTGCTTTGGAAGAGAAAGGGGTGGACTATGTGGATAGTCAAGAGGATTTGTTTGGGAGAAAGAGTGAGCTTCTGCTGAAGTCAAATCCTATTCATCAGAAAGTTCCTGTGTTCTTGCACAATGACAAACCTGTCACTGAATCTGCTATCATTGTTAGCTACATTGATGAGGTGTGGCCTTCCAACTCACTACTTCCAACTTGTGCATATGATCGTGCCCAAGCTAGATTCTGGGCTGACTCATTGACAAAAAGAGTATACTTAGATATTAAAGTATTTGAAACTGGGAGGAGTATCTGGGGGAGCAATGGAGAAGAGAGAGAAGTGGGCACTAGGGACTTCATTGAAGTTTTGAAGCATTTGGAGGAAGCTCTTGGAGAGAAAGACTACTTTGGTGGTGATGCCTTTGGGTATGTAGACATCATAGCTATTCCTCATTCTGCATGGTTTTTAACATATGAGAAGCATGGGGGCTTCAAAGTTGAAGATCATTGCCCAAAAATCTCAGCTTGGATTAAGAGATGCTTGCAAAGGCAATCTGTCAACAAAGTTCTGCCAGACCCAGAAAAGTTTACCAGTTTGTCCTGCATTTCAGGAAGATGTTAG 672 0.4196 MSKGDKVNVLDFWASPYCARVKIALEEKGVDYVDSQEDLFGRKSELLLKSNPIHQKVPVFLHNDKPVTESAIIVSYIDEVWPSNSLLPTCAYDRAQARFWADSLTKRVYLDIKVFETGRSIWGSNGEEREVGTRDFIEVLKHLEEALGEKDYFGGDAFGYVDIIAIPHSAWFLTYEKHGGFKVEDHCPKISAWIKRCLQRQSVNKVLPDPEKFTSLSCISGRC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi930g00006 223 SUPERFAMILY Thioredoxin-like 9 104 IPR036249 -
Sebi930g00006 223 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Sebi930g00006 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 213 IPR045073 -
Sebi930g00006 223 Pfam Glutathione S-transferase, C-terminal domain 135 196 - -
Sebi930g00006 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Sebi930g00006 223 CDD GST_N_Tau 7 81 - -
Sebi930g00006 223 FunFam Tau class glutathione S-transferase 1 89 - -
Sebi930g00006 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Sebi930g00006 223 SFLD Main (cytGST) 4 214 - -
Sebi930g00006 223 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Sebi930g00006 223 SFLD Main.3: Omega- and Tau-like 4 214 IPR045073 -
Sebi930g00006 223 SUPERFAMILY GST C-terminal domain-like 79 213 IPR036282 -
Sebi930g00006 223 Gene3D Glutaredoxin 1 89 - -
Sebi930g00006 223 Gene3D - 91 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi930g00006 Sebi-Chr930 54754 55929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi930g00006 4 216 Glutathione S-transferase Gene Family AT1G78380 53.271 5.67e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi930g00006 K00799 - gmx:100788517 370.548