Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00077 ATGGATCATGTCATCGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGAAGTGGATCTTTTGGCGAGCTTTATTTGGGTGTTAATGTGCAAAGTGGAGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAACTTCTCTATGAGTCAAAATTGTATACGCTTCTTCAAGGAGGAACTGGCATACCTCATTTAAAATGGTCTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTTCTCGGACCAAGTCTAGAAGACCTGTTTAACTACTGCAGTAGAAAATTCACTCTGAAAACAGTTTTGATGCTTGCAGATCAGCTATTAAACAGAGTTGAGTACATGCACTCGCGGGGCTTCCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGCAGGGCAAATCAG 432 0.4329 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLLYESKLYTLLQGGTGIPHLKWSGVEGDYNVMVIDLLGPSLEDLFNYCSRKFTLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRRANQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00077 144 PANTHER CASEIN KINASE-RELATED 8 140 - -
Sebi92g00077 144 FunFam Putative Casein kinase I 1 85 - -
Sebi92g00077 144 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sebi92g00077 144 Pfam Protein kinase domain 10 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00077 144 ProSiteProfiles Protein kinase domain profile. 9 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00077 144 Gene3D Transferase(Phosphotransferase) domain 1 86 143 - -
Sebi92g00077 144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sebi92g00077 144 SUPERFAMILY Protein kinase-like (PK-like) 4 137 IPR011009 -
Sebi92g00077 144 SMART serkin_6 9 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00077 144 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00077 Sebi-Chr92 1922261 1924888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00077 2 136 Miscellaneous Gene Families AT1G29230 25.000 5.90e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sebi92g00077 Pkinase 3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00077 K08960 - jre:108981384 281.952