Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00075 ATGGAAACTACAAGGCGCTGGTTTAGTAAGTTCAAGGCAAATGATAAAATGAAGTCTCCAAAACACAAGGAAGCTACAGGCATGACAAAAGAAGGGTTAAAACCCCCAACAAATGAAGAAGCCCCTTCAAATGTAACCAAACAGAAGGTTGAAGCTGCGAAACAGTACATAGAAAATCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGAGGAAGGAAAGACGTTGTATGCTAGAAAAGAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGTATCTAGAGAAAAAGGAGACAGAATACATGCGCCTCCAGAGACATAAGATGGGGGCTGATGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTTAAAGCTGAGAGGAACTTGCTTGCAGAAGTTGACAGCAATTGTATTGTAAAACTTTATTGTTCCTTTCAAGATGATGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTGATGCGGAAGGATATACTGACAGAAGATGAAGCCAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTGTTGGAATTAACAGAAGTGGAGCCCTTCAAAGTGATGGACGTCCTGCAGCTCCTAAACGAACACAACAGGAGCAACTGCAGCATTGGCAGAAAAATCGGCGGATGCTTGAAGCCATAAACGAGAGAAAACAGAACAGAGAAGGGGAGGAGAAAAACTCAAAAACAGGGCTGCTGGGTCATGCCGGAAAACCGCTAGAGAAGACGCCGGAGGTGTTGCGCAGTGGTGGTGGATATTTGCAAGGGTGGCTGGGCTGTGTACGACTGGGCATCGTTTCACAAGAAGGGCACACTGGTCTATTTAGTGCGAACGTTCAAGATCCTGCGTATTCTACAGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCAGATGAACCAATGTCAACTTGTAGAAAGGGCTTTGTGTCCATTGAATTCTGCAAGGCTCCTGTTCTTAGAAAAAGCCCATCTTGCTATATTGGAATTCAGAAGTACATTCTAAAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTTGTAGACTTCTATGTAACGTGGAGCAGAGACTTGGAACAAAAGGAGCCGAAGAAATAAAGGCCCACCCATGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGTGGACAAGCAAATTGAACCTTCCACAAAGGCAGGGCCATGGAGAAAGATGCTGCCATCCAAAGATATTAACTTCGTTGGCTACACATACAAGAATTTTGAAATCGTGAATGATCATGAAATACCTGGAATTGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGGCCGTCTATTAAGGCACTATTTGATAGTGAAGTGATACCAAATGGTTCCATTCTAGAACTGCACATACTTCTTCCTTCTACTTTGCATCACAGGGTAGCTGCTTCAATCTCCGACATTTTAGAAGATTAA 1851 0.4214 METTRRWFSKFKANDKMKSPKHKEATGMTKEGLKPPTNEEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRCMLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSVGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLEAINERKQNREGEEKNSKTGLLGHAGKPLEKTPEVLRSGGGYLQGWLGCVRLGIVSQEGHTGLFSANVQDPAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKGFVSIEFCKAPVLRKSPSCYIGIQKYILKEAKLSAEAKDLICRLLCNVEQRLGTKGAEEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDKQIEPSTKAGPWRKMLPSKDINFVGYTYKNFEIVNDHEIPGIAELKKKSTKPKRPSIKALFDSEVIPNGSILELHILLPSTLHHRVAASISDILED 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00075 616 SMART serkin_6 119 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00075 616 MobiDBLite consensus disorder prediction 298 313 - -
Sebi92g00075 616 MobiDBLite consensus disorder prediction 298 320 - -
Sebi92g00075 616 FunFam Non-specific serine/threonine protein kinase 364 505 - -
Sebi92g00075 616 MobiDBLite consensus disorder prediction 262 285 - -
Sebi92g00075 616 Pfam Protein kinase C terminal domain 504 548 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sebi92g00075 616 Pfam Protein kinase domain 365 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00075 616 Pfam Protein kinase domain 121 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi92g00075 616 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Sebi92g00075 616 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Sebi92g00075 616 SMART pkinase_C_6 486 550 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sebi92g00075 616 MobiDBLite consensus disorder prediction 1 29 - -
Sebi92g00075 616 PANTHER SERINE/THREONINE-PROTEIN KINASE 220 521 - -
Sebi92g00075 616 ProSiteProfiles AGC-kinase C-terminal domain profile. 486 558 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sebi92g00075 616 CDD MobB_NDR_LATS-like 53 114 - -
Sebi92g00075 616 Gene3D Phosphorylase Kinase; domain 1 44 223 - -
Sebi92g00075 616 MobiDBLite consensus disorder prediction 1 47 - -
Sebi92g00075 616 Coils Coil 283 303 - -
Sebi92g00075 616 Gene3D Transferase(Phosphotransferase) domain 1 224 315 - -
Sebi92g00075 616 Gene3D Transferase(Phosphotransferase) domain 1 341 505 - -
Sebi92g00075 616 SUPERFAMILY Protein kinase-like (PK-like) 93 527 IPR011009 -
Sebi92g00075 616 ProSiteProfiles Protein kinase domain profile. 119 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00075 Sebi-Chr92 1799397 1809601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00075 1 602 AGC Kinase Gene Family AT4G14350 62.321 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sebi92g00075 Pkinase 7.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00075 K08790 - ini:109176447 731.48