Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00069 ATGGCTCCGAAGAAGGGTGTAAAAGCTCCCGTCGCAGCTGCGAAGAAGAAACCGGAGAAGGTGACGAACCCATTGTTCGAGAAGCGTCCGAAGCAGTTTGGGATTGGAGGTGCGTTGCCACCGAAGAGGGACCTGACACGGTTCGTGAAGTGGCCGAAGACGGTTCAATTGCAGAGGAAGAAGAGGATCCTGAAGCAGAGGCTGAAGGTGCCACCAGCACTGAACCAGTTCACGAAGACACTGGATAAGAATCTGGCAACGAACCTTTTCAAGATGCTGCTGAAGGCTCAGGCAGAGGCTGATGGCAAACCTGTCGAAGCCAAGAAGCCTATTGTTGTCAAATACGGTCTCAATCACGTTACCTACCTCATTGAGCAGAATAAAGCACAACTTGTTGTGATTGCTCATGATGTTGACCCGATTGAACTGGTTGTCTGGCTTCCGGCATTGTGTAGGAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAAGCCCGCTTGGGAACGGCCAACTTCAACGACAAGTATGATGAATACAGAAAGAAGTGGGGTGGTGGGATTATGGGTTCCAAATCCCAAGCCAAGACCAGAGCCAAGGAAAGGCTCCTTGCCAAGGAAGCAGCCCAAAGAATGTCGTAG 639 0.507 MAPKKGVKAPVAAAKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQLQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKAQAEADGKPVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00069 212 ProSitePatterns Ribosomal protein L7Ae signature. 151 168 IPR004037 GO:0042254|GO:1990904
Sebi92g00069 212 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A/RS6 family signature 132 145 IPR018492 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A/RS6 family signature 148 158 IPR018492 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A/RS6 family signature 158 172 IPR018492 -
Sebi92g00069 212 PRINTS Ribosomal protein L7A/RS6 family signature 113 127 IPR018492 -
Sebi92g00069 212 MobiDBLite consensus disorder prediction 1 22 - -
Sebi92g00069 212 SUPERFAMILY L30e-like 106 170 IPR029064 -
Sebi92g00069 212 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 43 169 - -
Sebi92g00069 212 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 103 170 IPR004038 -
Sebi92g00069 212 Gene3D - 51 186 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00069 Sebi-Chr92 1730195 1732818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00069 1 212 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 71.429 5.00e-129 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00069 K02936 - jre:108984551 366.696