Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00038 ATGGAGGAGCAATACAAGGGAAAGAAGCAGGACAAGTTGAAGGAGACAAGGGGAAGGAAGAAGCTCGGTACCGAGGTGTCCGGCGGCGACCGTGGGGTAACTGAAGAAGCTGCTAGAGCTTATGATCAAGCAGCCTTTAACTTGAGGGGTCATGTTGCACTTTTGAATTTTCCTAATGAGTACCATTCTCAAGTTAAGGATTATCCTTCAATTTGGTACCATCCTCTTCCTCTTCAATTTTTCATCATGTCAGTGGCAGCAGCTCCTCTGGTGAACAAGGGAGGCAAGTTTTTGAGTTTGAGTATTTGGATGACACGGTGTTGGAGGAGCTTCTTGAGTCACAAGAGAAAAAGGGAAGAAAGGTTAATTGAGTATTAA 378 0.4471 MEEQYKGKKQDKLKETRGRKKLGTEVSGGDRGVTEEAARAYDQAAFNLRGHVALLNFPNEYHSQVKDYPSIWYHPLPLQFFIMSVAAAPLVNKGGKFLSLSIWMTRCWRSFLSHKRKREERLIEY 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00038 125 Pfam AP2 domain 17 51 IPR001471 GO:0003700|GO:0006355
Sebi92g00038 125 MobiDBLite consensus disorder prediction 1 26 - -
Sebi92g00038 125 SMART rav1_2 4 64 IPR001471 GO:0003700|GO:0006355
Sebi92g00038 125 MobiDBLite consensus disorder prediction 1 29 - -
Sebi92g00038 125 ProSiteProfiles AP2/ERF domain profile. 1 58 IPR001471 GO:0003700|GO:0006355
Sebi92g00038 125 Gene3D AP2/ERF domain 4 59 IPR036955 GO:0003700|GO:0006355
Sebi92g00038 125 SUPERFAMILY DNA-binding domain 31 59 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00038 Sebi-Chr92 626582 627026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00038 15 68 AP2-EREBP Transcription Factor Family AT3G23230 55.556 2.76e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi92g00038 AP2 5.4e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00038 - - jre:109006625 74.3294