Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00037 ATGGAGGAAGAAGGTGGTTCAAGAGGAAAAGGCAAAGATGAAGAGGAACATGTCAAGTATAGAGGTGTACGTAGGAGGCCATGGGGAAAATTTGCAGCAGAGATTCGTGACTCAACAAGACAGGGTCAGAGGTTGTGGCATGAAAATGTTGAAGACAGAGGAAGGAGTAGTGAGCAAGAAGGAAAACAAGTCTTTGAGATTGAGTACTTTGATGACAAATTGTTGGAGGAACTTCTTGGTTATGAAGACAAAAAGAAAAAGGAATAA 267 0.412 MEEEGGSRGKGKDEEEHVKYRGVRRRPWGKFAAEIRDSTRQGQRLWHENVEDRGRSSEQEGKQVFEIEYFDDKLLEELLGYEDKKKKE 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00037 88 PANTHER DNA-BINDING DOMAIN 14 46 IPR044808 GO:0003700|GO:0009873
Sebi92g00037 88 ProSiteProfiles AP2/ERF domain profile. 19 82 IPR001471 GO:0003700|GO:0006355
Sebi92g00037 88 SUPERFAMILY DNA-binding domain 19 46 IPR016177 GO:0003677
Sebi92g00037 88 SMART rav1_2 19 68 IPR001471 GO:0003700|GO:0006355
Sebi92g00037 88 MobiDBLite consensus disorder prediction 40 61 - -
Sebi92g00037 88 Pfam AP2 domain 19 46 IPR001471 GO:0003700|GO:0006355
Sebi92g00037 88 MobiDBLite consensus disorder prediction 39 61 - -
Sebi92g00037 88 Gene3D AP2/ERF domain 18 72 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00037 Sebi-Chr92 613992 614414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00037 1 86 AP2-EREBP Transcription Factor Family AT3G23230 32.374 2.28e-15 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi92g00037 AP2 6.8e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00037 - - rvl:131321366 90.1225