Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00033 ATGGATTCCTTAGAAGACAGCGGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCCTCCTCCCACCGATTTCCTTTGGTCCAATCCAAGTGTGAGCACGGAAATTGACTTGCCGGGTGGTGCTGTTACCTGTCAAGAGAACACCAGGAAGAGGGGACGCACTGATTCATGCTGCAAGGCAGGGACAAAAGCTTGCCGTGAGAAGTTGCGGAGGGAGAAACTCAATGAAAGGTTTTGTGACTTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAAAACAGATAAACCAGCTATACTTGATGATGCTATCAGAGTCTTGAGCCAGCTTAGAACTGAAGCTCAGGAACTCAAAGAAACAAATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAACGAACTCCGTGAAGAGAAACTTGTTTTGAAAGCAGATAAAGAAAAGATTGAGAGGCAGTTGAAAGCTATGCCCATTCCACCTGCAGGGTTTATGCCTCCCCCTGTGGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTACATCCCAATGTGGCAATATCTTCCTCCATCTGCTCGAGATACATCCCATGATCATGAGCTCAGGCCTCCTGCTGCATAG 645 0.4558 MDSLEDSGCWDFLDYSFIDPPPTDFLWSNPSVSTEIDLPGGAVTCQENTRKRGRTDSCCKAGTKACREKLRREKLNERFCDLSSVLEPGRPVKTDKPAILDDAIRVLSQLRTEAQELKETNEKLLEEIKCLKAEKNELREEKLVLKADKEKIERQLKAMPIPPAGFMPPPVAAYQAGVNKMAVYPNYGYIPMWQYLPPSARDTSHDHELRPPAA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00033 214 Coils Coil 100 155 - -
Sebi92g00033 214 FunFam Transcription factor bHLH104 62 143 - -
Sebi92g00033 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 137 IPR036638 GO:0046983
Sebi92g00033 214 SMART finulus 65 116 IPR011598 GO:0046983
Sebi92g00033 214 CDD bHLH_AtILR3_like 64 139 - -
Sebi92g00033 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 110 IPR011598 GO:0046983
Sebi92g00033 214 PANTHER BHLH TRANSCRIPTION FACTOR 7 214 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Sebi92g00033 214 Pfam Helix-loop-helix DNA-binding domain 63 110 IPR011598 GO:0046983
Sebi92g00033 214 Gene3D - 59 143 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00033 Sebi-Chr92 557619 560680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00033 40 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 70.330 5.18e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi92g00033 HLH 7.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00033 - - gmx:100787583 367.851