Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi92g00009 ATGAGTAGTACTCATCAGGTGGGGTTGCCTGGAGTAGACCCTTCAGGCAATTCACCACCTGGATTGAGCAAACGCCACACAGAACTTTCCATCAATGAAAGCAGTAGCAGAAGTGGTGGAAACAACAACAGAGATATTGAAGATGAAGATAGAGACAACTTTGATGAACCAAAAGAAGGTGCAGTTGAGATTGGAACAAGGAGACCAAGAGGAAGACCTCCTGGATCCAAAAACAAGCCAAAACCACCTATCTTTGTGACAAGGGATAGTCCAAATGCTTTAAGGAGCCATGTGATGGAGGTAGCTGGAGGAGCTGATGTTGCTGAAAGTGTAGCACAGTTTGCAAGGAGGCGTCAGCGTGGTGTTTGTGTCCTTAGTGGGAGTGGCTCTGTGGCTAATGTTACCCTTAGACAACCAGCTGCACCTGGTGCTGTTGTGGCACTTCATGGCAGGTTTGAGATTCTATCCCTAACTGGGGCTTTTCTTCCAGGACCTGCCCCTCCAGGTGCCACAGGACTCACAGTGTACCTTGCTGGGGGACAGGGACAGGTTGTTGGAGGGAGTGTTGTTGGATCTTTGGTTGCTGCAGGACCTGTTATGGTCATTGCTGCAACTTTTGCTAATGCTACTTATGAGAGATTGCCACTTGAGGAGGAGGAGGATGGTGGTGGGAATGGGAATGGTAGTAACAGTGGTATCCAAGGAGGTGGTGGTGTTGGAGGGTCTCCTCCTGGAATTGGAAGTAGTGGGGGCCAGTTGCAGCCTGGAGTTCTTCCAGATCCTTCTTCTTTGCCTTTGTATAATTTGCCACCAAATCTTATACCAAATGGAGGCCAAGTGGGACATGAGGCTTTTGCTTGGCCTCATGGAAGGCCTCCTTATTAA 885 0.4893 MSSTHQVGLPGVDPSGNSPPGLSKRHTELSINESSSRSGGNNNRDIEDEDRDNFDEPKEGAVEIGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDGGGNGNGSNSGIQGGGGVGGSPPGIGSSGGQLQPGVLPDPSSLPLYNLPPNLIPNGGQVGHEAFAWPHGRPPY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi92g00009 294 MobiDBLite consensus disorder prediction 1 90 - -
Sebi92g00009 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 290 IPR014476 GO:0003680
Sebi92g00009 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Sebi92g00009 294 CDD DUF296 95 178 IPR005175 -
Sebi92g00009 294 MobiDBLite consensus disorder prediction 217 264 - -
Sebi92g00009 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 219 - -
Sebi92g00009 294 FunFam AT-hook motif nuclear-localized protein 94 221 - -
Sebi92g00009 294 PIRSF ESCAROLA 15 294 IPR014476 GO:0003680
Sebi92g00009 294 MobiDBLite consensus disorder prediction 20 41 - -
Sebi92g00009 294 Gene3D - 94 221 - -
Sebi92g00009 294 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi92g00009 Sebi-Chr92 108145 109705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi92g00009 57 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 72.199 2.05e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi92g00009 - - qsa:O6P43_021453 353.599