Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi928g00011 ATGGGTGGAATAGGAAAGACAACTCTTGCTACTGTATTGTATGATAGGATCTGTTATCAGTTTGACGTTTGCTGTTTTATTGAGAATGTAAGCAAAGTTTATAGAGAAGGTGGTGCTATTGCTGTGCAAAAGCAAATCCTTAGCCAAACTTTAGATGAAATAAATCTAGAGACATACAGTCCTTCTCAAATATTTGGAATTGGATCGAACAAGGTTAAAGCTATAATTCTGGATCAAAATGAGGATATTTCTGAATGCCCTCAGTTGAGGGCTGAAGGGTTGTCAACAATGAGGGGCCTTATAATTCTGATATTATATCACAAGAATTTCTCAGGAAGCCTCAATTTTCTTTCTAACAACTTGCAGTATCTTCTATGGCATGGCTACCCTTTTGCTTCTTTGCCATTAGATTTTGAGCCGTATCGGCTTGTTGAATTGAATATGCCTTACAGCAACATCCAACGACTATGGGAAGGTCGCAAGGTTCTCCCTCATTTGAAAAGAGTGGATCTGAGCAACTCCAAATATCTCACAGAGACACCAAATTTTGCAGGGAGCCGACGACTTGAGCAGCTTGATCTGACAGGATGCATAAGCCTCTCCCATGTTCATCCATCAATTGAACTTCTTGAAAAACTTGCTTTCCTGAGTTTGGAAGGCTGTAGTAGTCTGGTCAGCCTTGATCTTGACACTACATCCAATTTATATTCTCTGAAAGTTCTACACCTCTCTGGCTGCACTGAACTAAGAAGCACACCAGATTTTACTGGGGTCTCAAATCTTGAGTACCTTGATATTGATCAATGTGTGAGTTTATCAATGGTTCAATCTATTGGAGATCTTTCAAAGCTTAAATTCTTGAGTTTGAGAGACTGCAAAAATCTTGTCAGTATACCTGGAAATGCTAATACTATGACATCACTTATTACTCTAGATTTATGTGGCTGCTCAAAACTTACGAATCTTCCCTTGCTGGGACAGACACCAGTGTCTGCAGAAAATATTTACCTCTCTGATGATGAACTCGCGTCTTCTATCTATCTGGGTTTTTTGGTTTTTTTGGACGTAGGCTTTTGCAATCTAAGTGAAGTCCCTGATGCTATTGAAGAGTTATGGCATTTAGAAAGGCTAAATCTAGAAGGAAACGACTTTGTTTCACTACCATCTTCTCTGGGCTTGCTTCCCAGACTAGCTTACTTAAACTTAGCTCATTGCAGCAGGCTTCATTTTTTGCCTGAGCTCAAGTTGTGCGCTACTGCTTCATTAGGGGGAAGTTATTTTAAAACAGTATCTGGATCTCATAATCATAGGTCAGGATTATATATTTTCAACTGTCCCTTCTTGCAGATCCCAGATGGAGGTCAAAACTTGGCATTTTCATGGCTAGAGAGGCTAGTCAAGAATCCTTGTCACTTCCGGTGTGGCTTTGACATTGTTGTTCCTGGGAACATAATTCCACAATGGTTTGATCATCAATTTATGGGATATTCTAGAGTGAGGATAGCGGAATGTGTGTCCAAGAGTGACAATTGGCTTGGATTTGCCTTTTGTGTGGCATTTAAGAAAATGTATCACCCTACAATGTTTGGTTCTTCAGAAGATTCATTTTCCTCATTTCTGCCATATTCTTTGTATCTTTCTTTTGAAAATGAACAAACGGAAGAAACTTTTGATATGCCACTTTGGTTAAAGTTTGATGGCTTGAATTCAGAACATCTGTGGATAATCTACATATCTCGGCCACACTGCCATTTTGTAACAACAGGAGCACATATCACATTTAAAGCTCGCCCAGGTTTGGAGCTGAAAACATGGGGGTTACGCATGGTATTCGAGAGTGATAACTTCAATCCACTCAGTGAGTTGGTGACAAACATTGAGGTTAATGAGGTAGAGTATCCTCCCTTGGATTACGAACATGAAAGCAGCAGCAACTCCAGGCATAAAATCCAGCTTCCTTATAATTGGTTGCTTACTGAGGATGTACATGAAGCTGACAGCAGCTCTGGGTCAAAATTCCAGCTTCCCTATAATTGGCATGTTACTGAGGAAGAGGAAAATGAGAGTTGGCAAGTGAACATGAAAAATACATATTAA 2097 0.3972 MGGIGKTTLATVLYDRICYQFDVCCFIENVSKVYREGGAIAVQKQILSQTLDEINLETYSPSQIFGIGSNKVKAIILDQNEDISECPQLRAEGLSTMRGLIILILYHKNFSGSLNFLSNNLQYLLWHGYPFASLPLDFEPYRLVELNMPYSNIQRLWEGRKVLPHLKRVDLSNSKYLTETPNFAGSRRLEQLDLTGCISLSHVHPSIELLEKLAFLSLEGCSSLVSLDLDTTSNLYSLKVLHLSGCTELRSTPDFTGVSNLEYLDIDQCVSLSMVQSIGDLSKLKFLSLRDCKNLVSIPGNANTMTSLITLDLCGCSKLTNLPLLGQTPVSAENIYLSDDELASSIYLGFLVFLDVGFCNLSEVPDAIEELWHLERLNLEGNDFVSLPSSLGLLPRLAYLNLAHCSRLHFLPELKLCATASLGGSYFKTVSGSHNHRSGLYIFNCPFLQIPDGGQNLAFSWLERLVKNPCHFRCGFDIVVPGNIIPQWFDHQFMGYSRVRIAECVSKSDNWLGFAFCVAFKKMYHPTMFGSSEDSFSSFLPYSLYLSFENEQTEETFDMPLWLKFDGLNSEHLWIIYISRPHCHFVTTGAHITFKARPGLELKTWGLRMVFESDNFNPLSELVTNIEVNEVEYPPLDYEHESSSNSRHKIQLPYNWLLTEDVHEADSSSGSKFQLPYNWHVTEEEENESWQVNMKNTY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi928g00011 698 Pfam Leucine Rich Repeat 143 159 IPR011713 -
Sebi928g00011 698 SUPERFAMILY L domain-like 89 448 - -
Sebi928g00011 698 Pfam C-JID domain 480 614 IPR045344 -
Sebi928g00011 698 Gene3D Ribonuclease Inhibitor 37 255 IPR032675 -
Sebi928g00011 698 Gene3D Ribonuclease Inhibitor 256 332 IPR032675 -
Sebi928g00011 698 Gene3D Ribonuclease Inhibitor 333 474 IPR032675 -
Sebi928g00011 698 ProSiteProfiles Leucine-rich repeat profile. 373 394 IPR001611 GO:0005515
Sebi928g00011 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 94 IPR027417 -
Sebi928g00011 698 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 78 227 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi928g00011 Sebi-Chr928 199540 204680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi928g00011 231 413 WRKY Transcription Factor Family AT4G12020 34.595 2.63e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi928g00011 - - vvo:131643801 763.837