Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi924g00003 ATGGCAAAAGAGAGTTTGTGTGCAAAGAAGAAAGAATGTGGGAATGGAAAGATGATGATGAAGAAGAATCTTGATCATGAAGGTTTTGCTAAGCAAATAATTTTTGCTATTTCTAATGAGCTTCTTGTTAAGGAAGGTTTAGACCCATCTCAGATTCTTTCTACATGCACAAACCATGTCATGGAAGGTGGTTCCATTACCATCAGCTTTCTTAAATCACAATGCAATGAGGAATCAAAGAAGAGCCTAAAAAGAAAACGTGAGAATCAAGACAATGTTGCTAACAAGAATTGCAAGACAAATAACAACAGCAACATTGCTAATGTTAATGATGTTATTCTTGACCAACCGGTTGGATTGCCAATGACATTCCAAGAAAAGATTCAAGAAATGGAAGGCCGTGAGGTGAAGTTGGTGATCCAAAAACAGCTCTTTAAGAGTGATCTGAACTCTAATAATGGAAGGTTCTCCATCCCAATACAACAAATTCGACATGATGCAAGGGATTTCTTGACAGAGACAGATGAATTTTGTTTGAAAGAGCGTAAAGGTGAAGGGAAAAACCAAAGGCTTGTTGGTTTCCCAGTGGCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAACACACAGAGGTGTACAATATAACTAGTGGATGGAACGAACTTTTGAGAAATAATTGTTTGAAAGCCAAAGATACAGTGCAGTTGTGGTCTTTCAGAAGCAACAGTAATCAGTTGTGTTTTGCACTTGTCAAGCTTTAA 786 0.3753 MAKESLCAKKKECGNGKMMMKKNLDHEGFAKQIIFAISNELLVKEGLDPSQILSTCTNHVMEGGSITISFLKSQCNEESKKSLKRKRENQDNVANKNCKTNNNSNIANVNDVILDQPVGLPMTFQEKIQEMEGREVKLVIQKQLFKSDLNSNNGRFSIPIQQIRHDARDFLTETDEFCLKERKGEGKNQRLVGFPVAVLDPSLKLYNMCFKKWKMEHTEVYNITSGWNELLRNNCLKAKDTVQLWSFRSNSNQLCFALVKL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi924g00003 261 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 57 261 IPR005508 GO:0003677
Sebi924g00003 261 Gene3D - 123 260 IPR015300 -
Sebi924g00003 261 CDD B3_DNA 140 252 IPR003340 GO:0003677
Sebi924g00003 261 SUPERFAMILY DNA-binding pseudobarrel domain 139 256 IPR015300 -
Sebi924g00003 261 Pfam B3 domain-containing protein At2g31720-like 126 231 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi924g00003 Sebi-Chr924 54985 55770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi924g00003 124 258 B3 DNA Binding Superfamily AT1G05930 26.471 1.97e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi924g00003 - - gmx:102667627 161.77