Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi922g00002 ATGCAAGGCATCACAAAGAGAGCTATTGATGGAGATGCCCTGCCACCAGAAGAGCAGGAACAAGGGCCCAAGAGACCCAAAGTGGTTAAACCCTTTGGTCATAGTGTTTCGCCATTTCAACCATGGCAACCCTCCTGGATGAAGGATCTTGGTATTGCACAAGAAAGCAATAGTGCAGGCAAGCCATGTCTTCAGCTTGGCAATTCCAATAGCCCTGTTGAACAAGATGAGAATAAGATGACTATAGAGAACTCAACTCCTGAATCTGATCATACTGATAAGAGCCCCATCAATGGTGGTGGTGCAACTTCAGGTGTTGGTGATGATGGCAAAGCTGGACAAACTGATAAAGACCAAACAGACCCACTTGCACCTGGCTCGGGCTGCAACACTCAACCAGAAATGGATCCTAAGAGGCTCGAAAGAATCATAGCAAACCGAGCTTCAGCACAAAGATCCAGGATGAGGAAAATTGAATATGTGGCGGGCTTGGAAGAGAAAGCAAAAACTTACCAGAATAAGATAAATCACCTTCATCCACAAATTGTAGCATGCAAACATCGCCAGCAATTATTGCAGATTGAGCAGCATAAACTGAAACTAGAAATGGCTATTTATGAAAAAGAAAGAATACTTCAAGAAGTGGAGATTGAAAAGAATAAGCAGGACATAAAAAGGCTAAACGAGCTCCACAAGCAAGTTGAAACTGAAGCAAGGGAAAAGATGTTGAATAGGAGTGCACATCCAATGCTGAATAGGAGTGCTGTTGTGCAACTTATGTCCAATCCCAACATGAATCCTTTTGGCTTAGGACCGCAATTTTTCTTAAACTCGTATCAAGGTTAG 846 0.4303 MQGITKRAIDGDALPPEEQEQGPKRPKVVKPFGHSVSPFQPWQPSWMKDLGIAQESNSAGKPCLQLGNSNSPVEQDENKMTIENSTPESDHTDKSPINGGGATSGVGDDGKAGQTDKDQTDPLAPGSGCNTQPEMDPKRLERIIANRASAQRSRMRKIEYVAGLEEKAKTYQNKINHLHPQIVACKHRQQLLQIEQHKLKLEMAIYEKERILQEVEIEKNKQDIKRLNELHKQVETEAREKMLNRSAHPMLNRSAVVQLMSNPNMNPFGLGPQFFLNSYQG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi922g00002 281 CDD bZIP_plant_RF2 139 190 IPR044759 GO:0003700|GO:0006355
Sebi922g00002 281 PANTHER BASIC LEUCINE ZIPPER 34 76 249 - -
Sebi922g00002 281 MobiDBLite consensus disorder prediction 1 138 - -
Sebi922g00002 281 Coils Coil 217 244 - -
Sebi922g00002 281 MobiDBLite consensus disorder prediction 11 27 - -
Sebi922g00002 281 MobiDBLite consensus disorder prediction 58 80 - -
Sebi922g00002 281 SMART brlzneu 134 205 IPR004827 GO:0003700|GO:0006355
Sebi922g00002 281 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 142 156 IPR004827 GO:0003700|GO:0006355
Sebi922g00002 281 Pfam Basic region leucine zipper 136 188 IPR004827 GO:0003700|GO:0006355
Sebi922g00002 281 Gene3D - 137 245 - -
Sebi922g00002 281 SUPERFAMILY Leucine zipper domain 138 187 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi922g00002 Sebi-Chr922 68023 70148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi922g00002 136 214 bZIP Transcription Factor Family AT3G58120 36.709 5.67e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi922g00002 bZIP_1 1.8e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi922g00002 - - lang:109356469 156.377