Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi921g00002 ATGAAGAGGAACATTTTGAGCACCACCTGCTTGAAAGGTTACACTACTCAGAGCACTAGTGTCACCAATAGCTCTCCAATAAAAGACTCCAACTATGCCAACTTCCACAACAAGAAGAACCAAATGGCAAAAGAATTTTGGGACTCCAACAACACTCATCATAGTAATGGATCAGAGGATTACATGAATGGCTTCCCCTGGCCACCAAGATCATATACTTGTAGCTTCTGCAGGAAGGAATTCAAATCTGCTCAAGCACTTGGTGGTCACATGAATGTTCACAGAAGGGATAGAGCAAGGCTGAGACAGTCATCACCAACTGATGGTCAAGGTTCTATGCTGAATCTTAACCTTAACCCTAACTGCTTAACCACCTCCTCTTCTTTGTCCTCTTCTTCTGCAATAACTGATCTCAAACCTGCTGTCACTTGCACATTACCCTTGTTTGTTTCTCCTACATCTTCTGCTTCTGCCTCAGATTCTGAGTTGAAGAGATGGGTTGTTGTGGATGGTATCTTAGTGAACCCTTTAAGCAAAAAGTCCAATATTAATGCAGAATCTTTGTCTGGGATTGGAGAACATGAAGATGGGCGTAAGATGATGAAGAAGGGTGAGATTCTCAGGATGGACTTGGAGATAGGTTTGCCTAGAGATTATGATTTAGATCTGGAGCTTCGTTTGGGTACTTATTCTTAG 696 0.4224 MKRNILSTTCLKGYTTQSTSVTNSSPIKDSNYANFHNKKNQMAKEFWDSNNTHHSNGSEDYMNGFPWPPRSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPTDGQGSMLNLNLNPNCLTTSSSLSSSSAITDLKPAVTCTLPLFVSPTSSASASDSELKRWVVVDGILVNPLSKKSNINAESLSGIGEHEDGRKMMKKGEILRMDLEIGLPRDYDLDLELRLGTYS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi921g00002 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Sebi921g00002 231 Pfam C2H2-type zinc finger 72 96 - -
Sebi921g00002 231 SMART c2h2final6 72 94 IPR013087 -
Sebi921g00002 231 Gene3D Classic Zinc Finger 68 115 - -
Sebi921g00002 231 SUPERFAMILY beta-beta-alpha zinc fingers 69 98 IPR036236 -
Sebi921g00002 231 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Sebi921g00002 231 PANTHER OS07G0101800 PROTEIN 46 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi921g00002 Sebi-Chr921 26450 27145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi921g00002 47 228 C2H2 Transcription Factor Family AT3G23130 37.879 1.02e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi921g00002 zf-C2H2_6 1.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi921g00002 - - var:108333719 237.269