Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi920g00006 ATGCAAGCAGACGAGGATGTTGGAAAGATAGCACTGGCTGTACCTGTTTTAGTTTCTAAAGCTCTAGAGCTATTTCTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGAGCAAAAACCATGAATTCATTGCACTTAAAACATTGTGTACAAAGCTACAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGGGTTCCTGACTACGGCCATGGCCATGGCCATGGACATACTGATACTGGTGCTGATGATCGGGCCATTTCAAGAAGAAGGAAAGCAGCTGGTGATGATTGTAATGACAGTGATGAAGAAGCTAAGAGAAGCAAGATGCAAGAGTTGGGCCACACTGGCGGTACTGGTAGGGGAAGAGGCCGCGGTAGAGGAAGAGGACGTGGTCGAGGGTCTCGAGCTGTAGTAAGAGGGGCATATCATCAGGAAGCTGAACCTGAACCTTGTTTTACTGTTCAGCAGGGGAGCCAACATAATACGAATACAAGTGTGGCAATACATGATGGTGCAGAATCAAAGGAGTTACCAAAGGAGAATATTGCAGTTCCTGTTGAAAGCTCTGAGTCACTCGGTACTATTGATCTGAATGCCAATACAAACGAAAACGAGGACAAAAAAGCTAACACAGCAGCTAATCCTTCACTGTCTGAACCTCCAACAGAAAGCAAGCATGAAGAAATTCCGGGCTGGTCCCTTTCTGATGTGGACAAGATGGCCATTGACTCAATGCAGCTTGCACAACTTGGCAGGGGACTAGAAGAGGATGAGGAAGATTATGATGAGGAAGGGTAA 813 0.4563 MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHTDTGADDRAISRRRKAAGDDCNDSDEEAKRSKMQELGHTGGTGRGRGRGRGRGRGRGSRAVVRGAYHQEAEPEPCFTVQQGSQHNTNTSVAIHDGAESKELPKENIAVPVESSESLGTIDLNANTNENEDKKANTAANPSLSEPPTESKHEEIPGWSLSDVDKMAIDSMQLAQLGRGLEEDEEDYDEEG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi920g00006 270 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
Sebi920g00006 270 MobiDBLite consensus disorder prediction 94 142 - -
Sebi920g00006 270 MobiDBLite consensus disorder prediction 94 115 - -
Sebi920g00006 270 MobiDBLite consensus disorder prediction 192 225 - -
Sebi920g00006 270 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Sebi920g00006 270 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 112 - -
Sebi920g00006 270 MobiDBLite consensus disorder prediction 187 240 - -
Sebi920g00006 270 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi920g00006 Sebi-Chr920 60456 63297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi920g00006 1 259 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.084 4.54e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sebi920g00006 CBFD_NFYB_HMF 2.3e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi920g00006 K21752 - gmx:100814712 371.318