Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi91g00037 ATGTCGAAGAAGAAGTCTAGCTTAGCTAGTGAGTTATGCACCCTTTGTGGTGTAGAGATCGCAATTGTTGTTTTCTCCCCTGCTGATAAGGCATTTTCTTTTGGCCATCCAGAAGTTGAGTCCATCATTAATCGTTATTTGACTCGAAACCCTCCACAAGAGTCTAGTGCTCACCAAATTGTTGAGGCACATAGAAATGCTAATGTTCATGATCTCAACATGCAGCTGACTCAGCTTCTTAGCCATTTGGAGGTTGAGAAGAAACAAGGAGAAGAGTTAGACCATGTGAGGAGAACTAGGCAGAGGCAATTTTGGTGGGAGAGCCCAATTGATGAGCTTGGCTTGAATGAATTGCTAAAGTTAAATGCTTCTATTGAGGAAATGAAAAAGAATTTAGGAAAACTTGCTAGGAAATTCATGACGGAGCAATTCAACATTTCTTCAACAAATGTTATTGGGGCTAATGGAATTGGACATTTTGATGCCTTTGAGAACAAATCTGGTGGTGGTGTTGGGATTAACATTTCTTCCACAGTTTCCAATTCCTATAATTATCTCGGTTTTTGA 567 0.3986 MSKKKSSLASELCTLCGVEIAIVVFSPADKAFSFGHPEVESIINRYLTRNPPQESSAHQIVEAHRNANVHDLNMQLTQLLSHLEVEKKQGEELDHVRRTRQRQFWWESPIDELGLNELLKLNASIEEMKKNLGKLARKFMTEQFNISSTNVIGANGIGHFDAFENKSGGGVGINISSTVSNSYNYLGF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi91g00037 188 Gene3D - 2 55 IPR036879 GO:0003677|GO:0046983
Sebi91g00037 188 Gene3D - 56 152 - -
Sebi91g00037 188 PANTHER MADS BOX PROTEIN 9 133 - -
Sebi91g00037 188 Coils Coil 118 138 - -
Sebi91g00037 188 SMART madsneu2 1 37 IPR002100 GO:0003677|GO:0046983
Sebi91g00037 188 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 9 34 IPR002100 GO:0003677|GO:0046983
Sebi91g00037 188 SUPERFAMILY SRF-like 8 55 IPR036879 GO:0003677|GO:0046983
Sebi91g00037 188 ProSiteProfiles MADS-box domain profile. 9 38 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi91g00037 Sebi-Chr91 2004281 2004936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi91g00037 1 157 Type I MADS-box Gene Family AT5G60440 45.181 1.23e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Sebi91g00037 SRF-TF 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi91g00037 - - lja:Lj0g3v0067779.1 255.758