Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi91g00035 ATGAATTCCGAAACCGATGATGTCGGTGTTGTAGAGAAAGATCCAACTTCACGATACGCACGGTATGATGAAATGTTGGGGAAAGGAGCCTTCAAGACTGTATATAAAGCTTTTGATGAAGTAGATGGAATAGAAGTTGCATGGAACCAAATTAGTGTTGAGGATGTTTTGCAGTCACCGCGAGGGTTGGAGAAGTTGTATTCGGAGGTTCATCTCCTTAAGTCATTGAAACACGAAAATATCATTAAGTTGTATAATTCTTGGGTGGATGATGAGAGCAGGACTATTAACATGATAACTGAGTTGTTCACATCTGGGAGTTTGAGGCAGTATAGGAAGAAACATAAGAATGTGGATTTGAAAGCCATCAAGAACTGGGCGAGGCAGATTCTTCGAGGCTTGTGTTTTCTGCATAGTCACAATCCTCCTATTATTCATAGGGACTTAAAATGTGATAATATTTTTGTTAATGGGAATACTGGACAAATTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCTACTGCCCGTAGTGTTATTGGTACACCAGAATTCATGGCCCCTGAGCTTTATGAGGAAGAATACAACGAACTTGTTGACATATATTCCTTTGGCATGTGCATCTTGGAAATGATCACCTGTGAATACCCGTATAGGGAATGTAAAAATCCAGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCTAAAGTAAAGGATCCTGAAGTGAAGCAATTTATAGAGAAGTGTCTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAACTACTAAAAGATCCATTCCTTGCAACTGAAAATTCAAAGGAGATCAATCATCATATGCTGCAAGTTCCTAAACCCCCCACCAAATTGGTGAATCCACCATCATGTGAGCCTCATCCCATGGAGATAGATTTAAACCTCAGGCATACTTCACCTGGCTCCTCTGTGACAAGAATTATAGAAACTTCTCAAGTTTCGAGTTTTGATCTCGTGAGGAAGACTGAGAATAACGAATTTAGGTTAAGAGGGGAGAAAAATGCAGAAAGTACAATTTCACTCACTCTGAGGATTGCTGATGCTCATGGTGGAGCAAGGAATATCCATTTTCCATTCTATATCGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTGGAACATCTGGAACTCAGGGATGAGGATGTGGCTGTCATTGCTGAGCTAATACATAACATGATTGTTGAGCTGGTGCCCAACTGGAAACCCTTATGTGAGAACCTCTCATCTGGAACAGATCATTTGTACAGACCTTCTGAAGTTCAGAATGGTGAACAATCAAACTGCCATTGGCCATTACGATCAAGTGATTTTGATACAAAGGCAATTTGTGAGGATTCAGTTCACTCACAGCTTGTTGAAGGAGAAGATCAGGAGAACCAAGAATCTGACATGTCAGATATTTCAGCAGAGTATGGGATTGCAATTGCCTCGGATTCTAAAGGTGTAGAGCCTGATCTTTTTATTCTTGACGAATGCCACGAGGGATCCAATGGCTTCAATTCCAATTCAGATGTCAGGTTTTGTGGTCAAGAAGATGAAAGCAAGAACCGTTCAGAAAACTCAGCTGGCTCTTTAATCAATTCATGTTGCAGTCCATCCAAAAACTTTGACATGTCAAGCACGTGTTCTCTTCTTACTCTACCTGACAAAGATCATTTAAATGAGCTGCAGCTGGAGCTTGAAGCAGTTGAAACCCAGTATCAGCAATGCTTTCGTGAGCTTATGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAGGAGATGGATAACAAGGAAGAAAATATCAGTTATATGA 1866 0.4057 MNSETDDVGVVEKDPTSRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISVEDVLQSPRGLEKLYSEVHLLKSLKHENIIKLYNSWVDDESRTINMITELFTSGSLRQYRKKHKNVDLKAIKNWARQILRGLCFLHSHNPPIIHRDLKCDNIFVNGNTGQIKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYRECKNPAQIYKKVTSGIKPAALAKVKDPEVKQFIEKCLVPASMRLPASELLKDPFLATENSKEINHHMLQVPKPPTKLVNPPSCEPHPMEIDLNLRHTSPGSSVTRIIETSQVSSFDLVRKTENNEFRLRGEKNAESTISLTLRIADAHGGARNIHFPFYIDSDTAISIAEEMVEHLELRDEDVAVIAELIHNMIVELVPNWKPLCENLSSGTDHLYRPSEVQNGEQSNCHWPLRSSDFDTKAICEDSVHSQLVEGEDQENQESDMSDISAEYGIAIASDSKGVEPDLFILDECHEGSNGFNSNSDVRFCGQEDESKNRSENSAGSLINSCCSPSKNFDMSSTCSLLTLPDKDHLNELQLELEAVETQYQQCFRELMKMREEAIENVKRRWITRKKISVI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi91g00035 621 FunFam probable serine/threonine-protein kinase WNK9 103 282 - -
Sebi91g00035 621 SUPERFAMILY Protein kinase-like (PK-like) 23 333 IPR011009 -
Sebi91g00035 621 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Sebi91g00035 621 Gene3D - 358 444 - -
Sebi91g00035 621 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi91g00035 621 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 360 416 IPR024678 GO:0004674|GO:0005524
Sebi91g00035 621 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi91g00035 621 Coils Coil 576 603 - -
Sebi91g00035 621 CDD STKc_WNK 18 277 - -
Sebi91g00035 621 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 606 - -
Sebi91g00035 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Sebi91g00035 621 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi91g00035 621 Gene3D Phosphorylase Kinase; domain 1 3 101 - -
Sebi91g00035 621 FunFam Probable serine/threonine-protein kinase WNK1 4 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi91g00035 Sebi-Chr91 1988071 1990512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi91g00035 3 620 MAP Kinase Kinase Kinase AT5G41990 51.942 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi91g00035 Pkinase 3.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi91g00035 K08867 - gmx:100783717 970.689