Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi91g00034 ATGAGTGACAATAGTAATGCTACAGATGTTGATCAATTCAATGAGATGTTAAGGAACTTGCTAGAGAGCCTCGCAAGCAATGCTTCATCAGGGGACTCCCTGCATAAATTTGCTACAGGAAATGTAAGGTCAGAATTTCAAACTATATTTGGTCTTGTGCAGTGTACACCTGATTTGTCAGAGCTAGATTTAAATGCATGTTTGATTGGGGCTATCTTAGAAATCCCACAATGTTGTGATAGCAAGAAAGGTGGTAGAATTCTACGACCTAGCTGTAACTTCAGATATGAGACATACCCTTTCTATGATTCTACCAATATTATTATTGCAGCACCACCAACAGGGTCTGCTCTTCGTCCCTCATCCACACAAGGTGAAAATGGTGATGAAATTAGACCAACTGAGACGTGGCAATTAGATTTCGCCACCATCATGGCCGCTACTAATAACTTTTCTCATGCAAGGAAGTTAGGACAAGGAGGATTTGGATCTGTTTACAAGGGTAAACTCTTTGATGGTCAGGAAGTTGCAGTCAAAAGGTTGTCTAGGAATTCCATGCAAGGAGATACAGAGTTTAAGAATGAAGCGGTGTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTAGGTTTCTGTTTGGAAAGAAAGGAAAGGCTACTGGTGTATGAGTTTGTTTCCAATAAAAGCCTTGATTTCTTCATATTTGGTAAGTCAAAACTCAACTTTTTGGTTGATATTGGACTCTACATCTGTTACTTCAAACTGTTGCACAGTTAA 783 0.3972 MSDNSNATDVDQFNEMLRNLLESLASNASSGDSLHKFATGNVRSEFQTIFGLVQCTPDLSELDLNACLIGAILEIPQCCDSKKGGRILRPSCNFRYETYPFYDSTNIIIAAPPTGSALRPSSTQGENGDEIRPTETWQLDFATIMAATNNFSHARKLGQGGFGSVYKGKLFDGQEVAVKRLSRNSMQGDTEFKNEAVLVAKLQHRNLVRLLGFCLERKERLLVYEFVSNKSLDFFIFGKSKLNFLVDIGLYICYFKLLHS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi91g00034 260 Gene3D - 1 101 IPR038408 -
Sebi91g00034 260 Pfam Salt stress response/antifungal 5 99 IPR002902 -
Sebi91g00034 260 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Sebi91g00034 260 Pfam Protein tyrosine and serine/threonine kinase 154 239 IPR001245 GO:0004672|GO:0006468
Sebi91g00034 260 FunFam Cysteine-rich receptor-like protein kinase 10 1 101 - -
Sebi91g00034 260 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Sebi91g00034 260 FunFam Cysteine-rich receptor-like protein kinase 10 116 226 - -
Sebi91g00034 260 Gene3D Phosphorylase Kinase; domain 1 117 226 - -
Sebi91g00034 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 242 - -
Sebi91g00034 260 SUPERFAMILY Protein kinase-like (PK-like) 127 243 IPR011009 -
Sebi91g00034 260 ProSiteProfiles Protein kinase domain profile. 151 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi91g00034 Sebi-Chr91 1936340 1940552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi91g00034 1 245 Receptor kinase-like Gene Family AT4G05200 43.960 1.46e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi91g00034 PK_Tyr_Ser-Thr 5.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi91g00034 - - gmx:113000773 314.309