Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi91g00027 ATGCAGGGCTTGAACATGTTGAGGAAAATCACAAGTGGTTTTATAGATGTTTATGAGAGTGGGAATTCTGACAAGCTTCCTGGTTTGAAAATTTATACTCTGCTTATGAACCTAACTGATGTGCAGAATGAGCTTTTGCAGAAACTGCAAAAGAAAATGGTTGGGTCCAGCGTGTTCCCTTTGGAGGGAGAGCTTATGGTAACCCTTGGATCAATGCATCCATGGTTGATCAAAACAGCAACAAGTGCGAATAAGTTTTACACTTCACAGCAGCTAAAGCAGCTAGAGAAGTTCAAGTCTGATTTCAGGGTAGGGTCAAAAGTGAGATTTATTTTGAACCTTATCTTTCATGTTGTCAAGGAGGAGAAGGTTCTTATCTTTTGTCGCAAACTTGCACCTATGAAGCTTTTAGTACAATTGTTTGAGGAGTGCTTCAAGTGGAAAAAGGATGGAGAAATTTTGTTACTTTATGGGGAACAAGACCTGTTTGAAAGAGGGAAAGTGGTTGATAAGTTTGAGGATCCATGTGGAGTTTCAAAGGTACTACTTGCTTCAATTATAGCTTGTCCTGAAGGTATTAGTCTTACTGCAGCTTCTCGGTTGATATTTTTGGACTCGGAGTGGAATCCATCGAAGATAAAGCAAGCTATTGCAAGGGATTTTCGTCCTGGCCAGGAAAAGATGGTTTATGTGTATCAACTCTTGGAAAAAGGCTCAATGGAGGAAGATAAGTACCTCAGAACCACATGGAAAGAATGGGTTTCCAACATAATTTTCAGTGAGGATTTTGTGGAGAACCCTTCCCAGTGGCAAGCAGAGAAGATTGAAGATGATATACTAAGGGAAATGGTTGAGAATGACGAGTCTAAAGCAATCCATATGATCATGAAGAATGAAAAAGCTTCAAAAAACTAA 915 0.3956 MQGLNMLRKITSGFIDVYESGNSDKLPGLKIYTLLMNLTDVQNELLQKLQKKMVGSSVFPLEGELMVTLGSMHPWLIKTATSANKFYTSQQLKQLEKFKSDFRVGSKVRFILNLIFHVVKEEKVLIFCRKLAPMKLLVQLFEECFKWKKDGEILLLYGEQDLFERGKVVDKFEDPCGVSKVLLASIIACPEGISLTAASRLIFLDSEWNPSKIKQAIARDFRPGQEKMVYVYQLLEKGSMEEDKYLRTTWKEWVSNIIFSEDFVENPSQWQAEKIEDDILREMVENDESKAIHMIMKNEKASKN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi91g00027 304 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 110 271 IPR001650 -
Sebi91g00027 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 288 IPR027417 -
Sebi91g00027 304 SMART helicmild6 135 224 IPR001650 -
Sebi91g00027 304 CDD SF2_C_SNF 99 235 - -
Sebi91g00027 304 Pfam Helicase conserved C-terminal domain 107 222 IPR001650 -
Sebi91g00027 304 Gene3D - 27 304 IPR027417 -
Sebi91g00027 304 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 2 303 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi91g00027 Sebi-Chr91 956994 957908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi91g00027 153 242 RAD5 or RAD16-like Gene Family AT5G05130 39.560 2.88e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi91g00027 K10875 - gmx:100781856 432.95