Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi91g00014 ATGGCTTTCACACTAGACAAGTGTGAGGAGAATAAGGTGTTCACTTTTGAGTCTCAGAAGTCAGTGCCAGCACCCTTCCTGACAAAGAAATACCAGCTTGTTGATGACCCTAGGACTGATCACATTGTGTCTTGGGGTGAAGATGAAACTATATTTGTTGTATGGAGACCCCTGAATTTGCTAGAGATCTTCTTCCAAACTATTTCAAACATAACAACTTCTCAAGCTTTGTTAGGCAACTCAATACCTATGGTTTTCAAGAAGGTAGTTGCTGATAGGTGGGAGTTTGCAATGAGTTCTTCAAAAAAGGAGCTAAGTATCTTTTATGTGAAATCCATAGGAGAAGAACACCTCAGCATAATCACCAACTCTACCATGATCAACCACCACAGATTCTTCAGCAAGATGAAAATCTATGTTAGCTTGACAATACTCCATCATTACCATCTCCTAAATCAAGCACGGTTGATATTTTAA 477 0.392 MAFTLDKCEENKVFTFESQKSVPAPFLTKKYQLVDDPRTDHIVSWGEDETIFVVWRPLNLLEIFFQTISNITTSQALLGNSIPMVFKKVVADRWEFAMSSSKKELSIFYVKSIGEEHLSIITNSTMINHHRFFSKMKIYVSLTILHHYHLLNQARLIF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi91g00014 158 Gene3D - 17 139 IPR036388 -
Sebi91g00014 158 SUPERFAMILY "Winged helix" DNA-binding domain 23 62 IPR036390 -
Sebi91g00014 158 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 98 IPR027725 -
Sebi91g00014 158 SMART hsfneu3 22 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi91g00014 158 Pfam HSF-type DNA-binding 26 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi91g00014 Sebi-Chr91 234685 235485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi91g00014 20 118 HSF AT1G46264 47.619 1.65e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sebi91g00014 HSF_DNA-bind 2.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi91g00014 K09419 - qsa:O6P43_014695 125.946