Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi918g00013 ATGAAAGAATCAACGGAATCGGACCCCATCCCCCTCCTGTGTTCCCTCCTCGATCAGGAAATCCCCACCGTTCACCACCTCAAAGGCAAGTGGTCCCTCGCCCGAGTCAAACTCACCCACCTCCAAACCCACCTCGCCGATTTCTCCGCTGAATACCCCAAATCCTCCGCATCCAACCCTCTCTCCCTCGACCTTCTCCATTCCCTCTCTCACACCCTCCACGACGCCGTTTCCCTCGCTCGCCAATGCCACTCCCCCAACTTACCCCGCGGCAAACTCCAAACCCAAAGCGACCTTGACTCCCTCCTCGCCACACTCGATCGCCACGTCACCGACTGCGACATCCTCTTCCGCAGCGGCGTCCTCCTCGAAACTAACCCTGCTTCTTCTAAAAGAGAAGCCGTTCGATCCGCTTCTAGAAACTTCATAACCCGTTTGCAAATCGGGTCACCCGACTCCAGAGCCTCCGCCATGGACTCCCTCCTCGCTCTCCTCCACGAGGACGACAAGAACGTCACCATAGCCGTCGCTCAGGGCGTGGTCCCTGTCCTCGTTCGCCTACTCGATTCCTCCTCCGAGATGAAGGAGAAAACCGTCGCCGCCATTTCTAGAGTCTCCACCGTGGAAAGCGGCAAGAACGTGCTCGTCGCGGAGGGTTTGTTGCTGCTGAATCACTTGCTTAGGGTTCTTGACTCTGGGAGTGGGTTAGCCATGGAGAAGGCTTGCGTGGCGCTTCAAGCGTTGAGTTTCACCAAGGACAACGCTAGAGCCATTGGATCCAGAGGTGGAATCTCATCGCTGTTAGGGATTTGCCAGGCTGGCACACCTGGCTCACAAGCTTCTGCGGCGGCGGTTTTGAGGAATCTTGCAAAGTTCGCTGAAATCAGACAGAATTTCACGGAGGAGAATGCGGTTGTTGTTCTCTTGGCTGTGGCTTCTTCCGGAACTGTTTTGGCTCGGGAAAACGCGATAGGGTGTTTGGCTAATTTGATTTCGGAGGATGAAAATTTGAGGGTTTCGGTGGTTAAAGAAGGTGGAGTTGAATGTTTGAGGAATTTCTGGGATTCAGGTCCACAGGTTCAGAGTCTTGAGGTTGCGGTTGAGGTCTTGAGGCATTTAGCTTCGAGTGCCCCTATTGCTGAGGTTCTCGTTACTGAAGGGTTCGTGGAGAGGGTGATGGGGGTGCTGAATTGTGAGGTTTTGGCAGTGAGAATTGCGGCGGCCAGAGCTGTTTATGCTTTGGGGTTGAGCAGTGGTAAAACAAGGAAGGAAATGGGGGAGTGTGGGTGTGTTCCCCTTCTGATTAAGATGTTGGATGGGAAAGGTGTGGAGGAGAAAGAAGCAGCTGCGATGGCATTGTCGGTGCTTCTGCTTCACCCTGGGAATAGGAGGATTTTCAGAAAGGATGAGAGGGGAATAGTGAGTGCTGTCCATCTCTTGAACCCTTCCTTGCACAATATGGATAAGCAATACCCTGTTTCGTTGCTCCACTCGCTCTTGCATTCCAAGAGTTGCAAGAAACAAATGGTGGCAGCTGGGGCTTGTGTATATACGCAGAAGCTTGTTGAAATGGATGTCCCTGGGTCCAAGAAACTATTGGAAGGCCTTGGTCGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAG 1647 0.5313 MKESTESDPIPLLCSLLDQEIPTVHHLKGKWSLARVKLTHLQTHLADFSAEYPKSSASNPLSLDLLHSLSHTLHDAVSLARQCHSPNLPRGKLQTQSDLDSLLATLDRHVTDCDILFRSGVLLETNPASSKREAVRSASRNFITRLQIGSPDSRASAMDSLLALLHEDDKNVTIAVAQGVVPVLVRLLDSSSEMKEKTVAAISRVSTVESGKNVLVAEGLLLLNHLLRVLDSGSGLAMEKACVALQALSFTKDNARAIGSRGGISSLLGICQAGTPGSQASAAAVLRNLAKFAEIRQNFTEENAVVVLLAVASSGTVLARENAIGCLANLISEDENLRVSVVKEGGVECLRNFWDSGPQVQSLEVAVEVLRHLASSAPIAEVLVTEGFVERVMGVLNCEVLAVRIAAARAVYALGLSSGKTRKEMGECGCVPLLIKMLDGKGVEEKEAAAMALSVLLLHPGNRRIFRKDERGIVSAVHLLNPSLHNMDKQYPVSLLHSLLHSKSCKKQMVAAGACVYTQKLVEMDVPGSKKLLEGLGRGKIWGVFARP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi918g00013 548 SMART arm_5 417 458 IPR000225 GO:0005515
Sebi918g00013 548 SMART arm_5 292 332 IPR000225 GO:0005515
Sebi918g00013 548 SMART arm_5 376 416 IPR000225 GO:0005515
Sebi918g00013 548 SMART arm_5 251 291 IPR000225 GO:0005515
Sebi918g00013 548 SMART arm_5 334 375 IPR000225 GO:0005515
Sebi918g00013 548 SMART arm_5 168 207 IPR000225 GO:0005515
Sebi918g00013 548 Gene3D - 359 524 IPR011989 -
Sebi918g00013 548 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 179 220 IPR000225 GO:0005515
Sebi918g00013 548 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 546 - -
Sebi918g00013 548 SUPERFAMILY ARM repeat 142 503 IPR016024 -
Sebi918g00013 548 Gene3D - 140 358 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi918g00013 Sebi-Chr918 156006 157652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi918g00013 74 456 U-box Gene Family AT2G23140 25.065 1.56e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi918g00013 - - vum:124844092 776.933