Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi918g00009 ATGGAAAAATTGAATTTTGTTAAAAATGGAGTATGCAGATTGCCTCCTGGTTTTCGTTTTCAGCCAACAGATGAAGAGCTTGTCTTTCAATACTTGAAATGTAAGATCTTCTCATGCCAATTGCCTGCTTCAATCATTCCTGAGATCAATGTCTGCAAGTACGATCCTTGGGATTTGCCAGGAAACTGTTATCAGCAAGAGAGGTACTTTTTCAGCTCTAAGGAAACTAAGTATCGAAATGGCAATCGTATGAACAGAACAACCAACTCTGGCTATTGGAAGGCAACAGGATCAGACAAAAAAATTTCACCATCAACAATAACTTGTGATGGTATTGCAGGGATAAGAAAAACTCTGGTATTCTATGAAGGGAAATCTCCAAATGGGTCTCGAACTGATTGGATCATGCATGAATATCGCCTTGTCAGTATAGAAACTACTGCTAGCAATTCATCCCAGAACTATGTAAACGAGATAGGGGATTGGGTACTCTGTCGCATATTCATGAAGAAAAGAAGTATAGAAATTGATGACAACACTGCTACCATGCTGAAGAAGAAAAATAGAGTGATGAATGTTCAGGGGACTCACCCAAGATTCTTTGATTTTATGAGGGTATACAAGTCAACTCCGGGTCCTATCCATTTTTCTAATTCTATCACATCTTCATCTTGTTCAAGTTCCAGTGACATTTTAGAGATTTCTTCTTCAGACCATGAAGAAACAATCGGCTATGCTGATTATTAA 747 0.3815 MEKLNFVKNGVCRLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVCKYDPWDLPGNCYQQERYFFSSKETKYRNGNRMNRTTNSGYWKATGSDKKISPSTITCDGIAGIRKTLVFYEGKSPNGSRTDWIMHEYRLVSIETTASNSSQNYVNEIGDWVLCRIFMKKRSIEIDDNTATMLKKKNRVMNVQGTHPRFFDFMRVYKSTPGPIHFSNSITSSSCSSSSDILEISSSDHEETIGYADY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi918g00009 248 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Sebi918g00009 248 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Sebi918g00009 248 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Sebi918g00009 248 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Sebi918g00009 248 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi918g00009 Sebi-Chr918 83920 85274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi918g00009 1 242 NAC Transcription Factor Family AT5G13180 51.362 1.13e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi918g00009 NAM 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi918g00009 - - aprc:113868555 368.622