Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi916g00002 ATGGAGGCTTCATGGGAACAAAGTGTCACATATTCTATCAACGCCATTTATCTTCTCTTCTCTGCATACCTTGTATTTGTAATGCAGATTGGCTTTGCCATGATATGTGCAGGATCTGTGCGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTGGTTGATGCTGTGGTAGGTAGCATTTCCTTCTACCTTTTTGGTTTTGCATTTGCCTATGGCAATTCCAACCCTTTCATTGGTACCGATTTCTTTGCTTTAGCTAAGATTCCAAATGGCACTTATGACTATAGTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCAGTAGGTGGCATCACTAGTGGGTCTATAGCTGAGAGAACCCAATTCTGTGCCTATCTTGTTTTTTCATTTTTCCTTACTGGGTTTGTCTACCCAGTTGTGGTCCATTGGGTCTGGTCATCCACTGGTTGGCTTAGTCCCAGTTCTAGTGACTTGTTCCTGGGCTCAGGTGCCATTGACTTTGCAGGTAGTGGAGTGGTGCATTTGGTTGGTGCAATTGCTGGGCTTTGGGGATCTATCATAGAAGGCCCACGGGTTGGCCGGTTTGATGCTTATGGCAAGCCCATACCTCTCCGTGGCCACAATGCAACACTTGTGGTGCTAGGAACTTTTTTGTTGTGGTTTGGTTGGTTCGGGTTTAATCCGGGTTCGTTTGACCGGATCGTCGTGGCTTACCCTAGTACATCCGATGAAGGTAATTGGACTTCTGTGGGTCGAACCGCCTTGACAACTACGTTAGCAGGCTCAACCGCCGGGCTTGTCACCTTGTTCGGTCGCCGGTTGTTGATAGGTCATTGGGATGCAATGGATGTTTGCAATGGCTTGCTTGGTGGCATGGGTCTTGATTGGGCTCAACATCTTAGCACTAAATTGAACTATGATGACCCATTAGAGGCAGCCCAATTGCATGGTGGGTGTGGGATTTGGGGTTTGTTGTTTACAGGGCTGTTTGCTAAAGAGGAGTTTGTGATTCAAGCCTATAATTCAGGGGTGGCAGTGAAAAGACCTTATGGGCTTTTACTTGGAGGTGGATGGGGTTTGATTGGAGCCCAAGTGGTTGAGATTTTGGTAATTGTTGGATGGGTTAGTGCAACAATGGGCCCTATGTTCTACGCCTTGCACAAGCTTAATATACTGAGAATTCCTAGGGATGATGAACTTGCTGGCCTTGATATCTCAACCCATGGAGGCTATGCTTATGCTCCTCAAGAGGATCATTATCCACGATCTTATGGAGATTATATGCATATCCAGGATGACCAATCATAG 1311 0.4607 MEASWEQSVTYSINAIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTDFFALAKIPNGTYDYSFFLYQWAFAIAVGGITSGSIAERTQFCAYLVFSFFLTGFVYPVVVHWVWSSTGWLSPSSSDLFLGSGAIDFAGSGVVHLVGAIAGLWGSIIEGPRVGRFDAYGKPIPLRGHNATLVVLGTFLLWFGWFGFNPGSFDRIVVAYPSTSDEGNWTSVGRTALTTTLAGSTAGLVTLFGRRLLIGHWDAMDVCNGLLGGMGLDWAQHLSTKLNYDDPLEAAQLHGGCGIWGLLFTGLFAKEEFVIQAYNSGVAVKRPYGLLLGGGWGLIGAQVVEILVIVGWVSATMGPMFYALHKLNILRIPRDDELAGLDISTHGGYAYAPQEDHYPRSYGDYMHIQDDQS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi916g00002 436 Pfam Ammonium Transporter Family 299 414 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi916g00002 436 Pfam Ammonium Transporter Family 17 293 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi916g00002 436 Gene3D Ammonium transporter AmtB like domains 2 426 IPR029020 -
Sebi916g00002 436 PANTHER AMMONIUM TRANSPORTER 300 410 - -
Sebi916g00002 436 SUPERFAMILY Ammonium transporter 11 395 - -
Sebi916g00002 436 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi916g00002 Sebi-Chr916 14409 15790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi916g00002 7 428 Inorganic Solute Cotransporters AT1G64780 60.879 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi916g00002 K03320 - qsa:O6P43_014033 707.212