Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi915g00014 ATGAGAGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATCGATTACTCCCTGACAGCCTGAGAGAAAGAATCAGACGACATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAAGACACTTTGATTCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTTTGCTTGGCTTTGCTGATGAGGTTGTTTCATTCTGGGGAATTTTTTACACATCTGCGTGTGGAAGTGGTGCCAATATTTGAGAAAATGGATGAGCAACTTTTGGATGCAGTATGTGACCGTCTCAAGCCAGTGCTTTACACAAAAGAAAGCTGCATTGTCCGGGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGAGGCAAGCTATTGACTGTGACAACTAATGGTGGAAGAACAGGCTTCTTTAACTCTGAATTCCTCAAGGCTGGTGACTTCTGTGGAGAGGAGCTTCTTACATGGGCACTAGATCCTCATTCCTCATCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCCTTTGCTCTAAAAGCTGATGACTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAGATTCGCCACACTTTCAGGTTCTACTCACAACAATGGCGTACATGGGCTGCATGCTTCATACAAGCAGCATGGAGACGCTATAGTAAAAGGAAGCTTGAAGAGTCTCTCAAGGAAGAGGAGAATAGGCTGCAAGATGCATTGGCTGAGGCAGGTGGTAGCTCACCTAGTCTAGGTGCCACAATATATGCTTCAAGATTTGCTGCTAATGCACTTAGAGCTTTACGTAGAAATGGCACTAGGAAGACCAGGGTGCCAGAGAGAATACCACCCATGCTGCTCCAGAAGCCTGCTGAACCTGATTTTACTGCTGAAGAGCAATAG 945 0.454 MRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDTLIRNLPKDLRRDIKRHLCLALLMRLFHSGEFFTHLRVEVVPIFEKMDEQLLDAVCDRLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEFLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQIRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLKEEENRLQDALAEAGGSSPSLGATIYASRFAANALRALRRNGTRKTRVPERIPPMLLQKPAEPDFTAEEQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi915g00014 314 FunFam Cyclic nucleotide-gated ion channel 1 1 61 - -
Sebi915g00014 314 Gene3D Jelly Rolls 83 203 IPR014710 -
Sebi915g00014 314 CDD CAP_ED 85 216 IPR000595 -
Sebi915g00014 314 SMART cnmp_10 85 216 IPR000595 -
Sebi915g00014 314 ProSiteProfiles IQ motif profile. 221 250 IPR000048 GO:0005515
Sebi915g00014 314 Gene3D Helix hairpin bin 1 61 - -
Sebi915g00014 314 ProSiteProfiles cAMP/cGMP binding motif profile. 85 169 IPR000595 -
Sebi915g00014 314 SUPERFAMILY cAMP-binding domain-like 2 207 IPR018490 -
Sebi915g00014 314 Pfam Cyclic nucleotide-binding domain 105 196 IPR000595 -
Sebi915g00014 314 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 309 - -
Sebi915g00014 314 MobiDBLite consensus disorder prediction 286 314 - -
Sebi915g00014 314 FunFam Cyclic nucleotide-gated ion channel 1 83 201 - -
Sebi915g00014 314 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi915g00014 Sebi-Chr915 229955 231593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi915g00014 1 313 Ion Channels AT5G53130 82.540 5.14e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi915g00014 K05391 - gmx:100815774 550.821