Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi915g00008 ATGACCATGGAAGATTTTTATGATATTAAGACATCAATCATTGACGGTCATTCGGTATGCTTGTTTGGAATATTTGATGGTAAGATTTTCCAGCTTCATCACTTGCTTGGGAGAAAGATAATTCTTTCCTCTTCTCCAAGCAACACAAAGGAAAGCATGGTTCTATTTGACAACAGTGAAGCAGGTCATGGTGGTTCTCGTGCTGCTGAATATTTGAAGGAGCATCTATTTAATAATCTCATGAAGCATCCAAAGTTTTTTACAGATACCAAATTGGCTATAAGTGAAACATATCAGCAAACTGATGCTGACTTTCTGAATTCTGAAAAAGATACTTTTCGTGATGATGGTTCAACTGCTTCAACAGCAGTTTTGGTTGATAAGCATCTTTATGTTGCAAATGTTGGAGATTCTAGAACTGTAATATCAAAAGCTGGAAAAGCAATTGCGCTATCTGAGGATCATAAGCCTAACAGAAGTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGATGCAATGGGGATGGTTCAGATTTTAATGGGCTTTCTGTCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGCAATCGTATGTTGAAGCCATTTGTGGTAGCAGAACCTGAGATCCAGGACCAGGAGATAAATGAAGAAACTGATCTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACCAAATGACGACGCTGTTTCTCTTGCCCGCGCAGAGGAGGAGGCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCTGCTTTTGCTCGTGGTAGTGCAGATAACATTACTTGCATTGTGGTGCGCTTCCATCATGAAAAAGCATCATTCCCAGCTAATCCTGACAAGGCAGGTCCAGCTAGCAGTCAGCATGAATAG 924 0.4242 MTMEDFYDIKTSIIDGHSVCLFGIFDGKIFQLHHLLGRKIILSSSPSNTKESMVLFDNSEAGHGGSRAAEYLKEHLFNNLMKHPKFFTDTKLAISETYQQTDADFLNSEKDTFRDDGSTASTAVLVDKHLYVANVGDSRTVISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWADAMGMVQILMGFLSGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEINEETDLLVLASDGLWDVVPNDDAVSLARAEEEAEAAARKLTEAAFARGSADNITCIVVRFHHEKASFPANPDKAGPASSQHE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi915g00008 307 SMART PP2C_4 11 283 IPR001932 -
Sebi915g00008 307 PANTHER PROTEIN PHOSPHATASE 60 285 IPR015655 GO:0004722|GO:0006470
Sebi915g00008 307 ProSiteProfiles PPM-type phosphatase domain profile. 42 285 IPR001932 -
Sebi915g00008 307 CDD PP2Cc 2 285 IPR001932 -
Sebi915g00008 307 Gene3D - 44 305 IPR036457 -
Sebi915g00008 307 Coils Coil 251 271 - -
Sebi915g00008 307 Pfam Protein phosphatase 2C 44 278 IPR001932 -
Sebi915g00008 307 SUPERFAMILY PP2C-like 62 286 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi915g00008 Sebi-Chr915 160381 165779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi915g00008 2 293 PP2C-type Phosphatase Gene Family AT5G53140 68.493 1.42e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi915g00008 K17506 - gmx:100805795 411.379