Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi914g00003 ATGGCTGCAACTTTGGTTGGAGGTGCATTTCTCTCTGCTTCTGTTCAAAACTTAATAGACAAACTAACTTCATCAGAGTTCCGAGATTACATCACAAACAGGAAGCTGAATGTCACACTCTTGAAAGAGTTGGAAACAACACTGCTTACTCTTCAGGCTGTGTTGGATGATGCAGAGGAGAAGAAGATCATCAACCCGGCTGTCAAACAATGGCTAGATGAGCTGAAAGATGCAATTTTTGATGCTGAGGATTTGCTCAGCCAAATAAGTTATGATTCCCTGCGAAGCAAGGTGGAGAATACAGAAGCTGAAAACATCACTAATCAGGTGTGGAACTTCCTTTCATCTCCTTTTAACACCTTATATAGAGAGATCAATTCCCAAATGAAGAATATGTGTGAAAGGCTGCAACTTTTTGCACAACATAAAGACATCCTCGGTTTGCAAACTGTAAGTGGGAGAGTTTCTAGGAGAATGCCAACAAGTTCAATAGTAAATCGATCTTCTATGGTTGGTAGGAAGGATGATAAAGAGAAACTAATTAATATGTTGCTATCAAACAATGGTACCAGCAGTAATAACATAGGTGTTGTCACAATTTTAGGCATGGGTGGTGTTGGAAAAACCACACTTGCTCAACTTCTTTACAATGACGAAGAAGTTGAAAAACATTTTGATCTAAAAGCCTGGGCATGTGTGTCAGAGGATTTTGATATTTTCAGACTAACCAAAACTCTTCTTGAATCTGTCACTTCAAGAGCTTGTGAAAGAAATGATCTTGATTTTCTTCGAGTTGAGTTAAGGAAAAACTTGAGTGATAAAAGATTTTTGTTTGTATTGGATGATCTATGGAATGACAAATATAATGATTGGGATGAACTAGTAACTCCCTTGATTAATGGAAAAACTGGAAGCAGAGTGATCATAACAACACGTCAACAAAAAGTTGCAGAAGTCACACATACATTTCCTATTCATAAATTAGAACCCCTGTCAGATGAAGACTGTTGGTCATTACTCTCCAAGCATGCATTTGGAAGTGAAGACTTTCATGGTAATGAATACCAAAGCCTAGAAGCAATTGGCAAGAAGATTGCAAAAAGGTGTGGGGGATTGCCAATAGCAGCCAAGACGCTTGGAGGACTTCTACGTTCAAAAGTAGATGCAAAGGAGTGGACTGCAATTTTGAACAGCAATATATGGGAGTTACCAAATGATGATATTCTTCCTGCTTTGCTTTTGAGTTATCAATATCTTCCCTCTCATTTGAAAAGATGTTTTGCTTACTGCTCAATTTTTCCCAAGGATTATCCACTTGATAGGAAACAACTGGTTTTGTTGTGGATGGCAGAGGGTTTCCTTGAACATTCTCAATGCAAAAAAGCAATGGAAGAGCATCTCACTGAATTGCCAGCACATGTTGAAAAGTTGGTTAATTTACGTCATCTTGATATTAGTTTAACGAGCATAAGGGAGATGCCAATGCAAATTGTTGAATTAGAAAACCTACAAACTTTAACTGTTTTTGTAGTGGGCAAGCAACAAGGTTTAAGTATCAAAGAGCTTAGGAAGTTTCCTCACCTGCAGGGAAAACTTTCCATCTTGAACCTGCACAATGTCATTGATGTCATGGAGGCATATGATGTCAATTTGAAGAGTAAAGAACAAATTGAGGAGTTAAAGCTATGTTGGGGCAAATTGACAGAAGACTCACAAAAAGAAAAAGGTGTGCTTGATAGGTTGCAACCGACAATAAACCTGAAGAGACTTTCCATCGGCTCCTATGGCGGGACAAGCTTTCCTAGTTGGTTGGGGGATTCTTCATTTTCTAACTTGGTGTCCGTTCACATAGGTGGTTGTGAATATTGTGTAACACTTCCACCATTAGGGCGTCTACCTGCTCTCAAGGACCTAAGAATTAGTAGCATGACATTAGAGACAATTGGCCCAGAATTCTATGGGCTGTCAATGGAAGGTTCCCTTTCTTCATTCCAACCATTTCCATCCCTGGAGTTTTTGGGATTTTGGTGCATGTCAAATTGGAAGGAATGGGTACCCTTTGAAAATGGCAAATTTCCTTTCCCTCGTCTTAAAAAACTGGAGATGCAGAGGTGTCCTGAGTTGAGGGGACATTTGCCAAGCCATCTTTTCTCCATTGAAGAAATTTTAATTTATCATTGTGATCATCTCTTGGCAACACCCCCTACTTTACATTGGCTGTTGACAGTAAAAAAAATTAATATTGGTCAAGATTTTCCTTCTCAAGGGTCTACTGAAAAGTTCCAATGCTCGTTGCTTGAGTGTGATTCTCCATGTCTGCTGCAGCATATCGACATGAGGTTCCGTGATAAGCTACTGTCTCTACCAAAAATGATTCTGAGCAGCACTTGTCTTCGGTATTTGAGACTCGATTATGTTCCATCTCTCACTGCATTTCCAGCTAATGGTCTACCTACTTCGTTACAGTCACTTGAAATTTATGGGTGTGAGAACTTAACATTCCTGTCTCCTGAAACATGGACCAATTACACATCCCTTGAGACTTTGAACATTATAGATAGCTGCAACTCACTTACATCCTTCCAATTGGATGGTTTCCCTGTGCTCCAACGTCTTTTCATTTGCCGTTGTAGCTGTCTGGAATCCATTTTCATTTCAGAGAGTTCTTCCCTTTTGCCGCTAAGCCTCCAATCACTTATTGTCCATGAATGTAAAGCACTTAGATCACTGCCTCAACGGATAGACACCCTCGCTGCTCTTGACTACTTGTCTCTCACAAAGCTTGCAAAACTAGAATGGTCGTTTTCTGAAGGAGCTTTCCTGCCTCCTAAATTACGATCATTTGAAATTAACTCCCTAAGACTACCGCCTCCAACACCCATGACCGAGTGGGGTCTCCAAAGCCTGACTGCTCTTTCAGATTTGAGTATTGGAAGTGATGAGATTGTTAACAGCTTGCTGAAGGGGAATTTGCTGCCCATTTGTCTTGTGTCTCTGTGTATCACTGATCTCTCTGAAATGAAATCATTAGATGGAAATGGTCTTCAACACCTCTCCTCTCTAGAAAGACTTAAGTTTGATGACTGCCCAAGACTTGAATCCTTGCCAGATGACAAGTTGCCTTCCTCTCTTAAGATACTGGAAATCGAAGAATGCCCTTTGTTAGAAGGAAAGTATAAAAGTCAGAGCGGGGAACGTTGGACCAACATTGCTCACATCCCTGTCATTATAATAAATCAGGAAGTCACAATATGA 3255 0.4009 MAATLVGGAFLSASVQNLIDKLTSSEFRDYITNRKLNVTLLKELETTLLTLQAVLDDAEEKKIINPAVKQWLDELKDAIFDAEDLLSQISYDSLRSKVENTEAENITNQVWNFLSSPFNTLYREINSQMKNMCERLQLFAQHKDILGLQTVSGRVSRRMPTSSIVNRSSMVGRKDDKEKLINMLLSNNGTSSNNIGVVTILGMGGVGKTTLAQLLYNDEEVEKHFDLKAWACVSEDFDIFRLTKTLLESVTSRACERNDLDFLRVELRKNLSDKRFLFVLDDLWNDKYNDWDELVTPLINGKTGSRVIITTRQQKVAEVTHTFPIHKLEPLSDEDCWSLLSKHAFGSEDFHGNEYQSLEAIGKKIAKRCGGLPIAAKTLGGLLRSKVDAKEWTAILNSNIWELPNDDILPALLLSYQYLPSHLKRCFAYCSIFPKDYPLDRKQLVLLWMAEGFLEHSQCKKAMEEHLTELPAHVEKLVNLRHLDISLTSIREMPMQIVELENLQTLTVFVVGKQQGLSIKELRKFPHLQGKLSILNLHNVIDVMEAYDVNLKSKEQIEELKLCWGKLTEDSQKEKGVLDRLQPTINLKRLSIGSYGGTSFPSWLGDSSFSNLVSVHIGGCEYCVTLPPLGRLPALKDLRISSMTLETIGPEFYGLSMEGSLSSFQPFPSLEFLGFWCMSNWKEWVPFENGKFPFPRLKKLEMQRCPELRGHLPSHLFSIEEILIYHCDHLLATPPTLHWLLTVKKINIGQDFPSQGSTEKFQCSLLECDSPCLLQHIDMRFRDKLLSLPKMILSSTCLRYLRLDYVPSLTAFPANGLPTSLQSLEIYGCENLTFLSPETWTNYTSLETLNIIDSCNSLTSFQLDGFPVLQRLFICRCSCLESIFISESSSLLPLSLQSLIVHECKALRSLPQRIDTLAALDYLSLTKLAKLEWSFSEGAFLPPKLRSFEINSLRLPPPTPMTEWGLQSLTALSDLSIGSDEIVNSLLKGNLLPICLVSLCITDLSEMKSLDGNGLQHLSSLERLKFDDCPRLESLPDDKLPSSLKILEIEECPLLEGKYKSQSGERWTNIAHIPVIIINQEVTI 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi914g00003 1084 Pfam NB-ARC domain 174 397 IPR002182 GO:0043531
Sebi914g00003 1084 Coils Coil 41 61 - -
Sebi914g00003 1084 SUPERFAMILY L domain-like 466 750 - -
Sebi914g00003 1084 Gene3D - 14 137 - -
Sebi914g00003 1084 SUPERFAMILY L domain-like 769 1070 - -
Sebi914g00003 1084 Gene3D - 152 323 IPR027417 -
Sebi914g00003 1084 Gene3D Ribonuclease Inhibitor 454 738 IPR032675 -
Sebi914g00003 1084 PRINTS Disease resistance protein signature 197 212 - -
Sebi914g00003 1084 PRINTS Disease resistance protein signature 1016 1032 - -
Sebi914g00003 1084 PRINTS Disease resistance protein signature 369 383 - -
Sebi914g00003 1084 PRINTS Disease resistance protein signature 270 284 - -
Sebi914g00003 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 430 IPR027417 -
Sebi914g00003 1084 Gene3D - 330 419 IPR042197 -
Sebi914g00003 1084 FunFam Probable disease resistance protein At1g61300 154 322 - -
Sebi914g00003 1084 PANTHER DISEASE RESISTANCE PROTEIN RP 468 729 IPR044974 GO:0006952
Sebi914g00003 1084 Pfam Rx N-terminal domain 10 100 IPR041118 -
Sebi914g00003 1084 Gene3D Ribonuclease Inhibitor 757 1071 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi914g00003 Sebi-Chr914 54984 58742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi914g00003 194 505 WRKY Transcription Factor Family AT5G45050 24.695 3.29e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi914g00003 - - tpra:123915821 694.886