Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi911g00008 ATGGGAACAAATCTCAGCATTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGAGCATCTTAGATATGGCTTATCATCTATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCACATCTTGATCTGGATGCATCCACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAATATCTTCACCAACAGGTGCTTAGGAGTGAAGCATACACAGCTGGAGATGTTGGAACCTCTCTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGCCAAAGGGGATGGAGGGAATTAGCGGTCTTGGGTGATAAGATAAACAAGTTTAATGGAATGGTAGAAGGATTGATTTGGTCCCCACGAAGCAGTGATAGTAAGAAGGACCAAGGTGATGGTTGGGCCTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGTACTGCCTGTGTTGCGATCATTAGAGACAACGAACTTTTTGTAGCAAATGCTGGTGATTCCCGCTGTGTAATATCTAGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAATTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGACATGGAATTTAAGAAGAATAGATTTCTTTCTGCTGAAAAACAAATAGTGACTGCCAATCCAGATATAAACATTGTTGACCTTTGTGATGAAGATGAATTTTTAGTGCTCGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTAGATTTTGTACGTCAAGAACTGCTTATGGAAACAAAACTTTCTGCTGTTTGTGAAAGAGTATTAGATCGGTGTTTGGCACCATCAATTGCTGTTGGTGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACCAGTACAGTCCAATGCACCTGCTCAAGAGCAATCCTCTTCAAATGAACAAGCAAGACTGGAGAGTAGTGCAAGTTAG 1074 0.4171 MGTNLSIPKTEKFSEDGENEHLRYGLSSMQGWRATMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLRSEAYTAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKINKFNGMVEGLIWSPRSSDSKKDQGDGWAFEEGPHSDFAGPTSGSTACVAIIRDNELFVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRINGSLNLARAIGDMEFKKNRFLSAEKQIVTANPDINIVDLCDEDEFLVLACDGIWDCMSSQQLVDFVRQELLMETKLSAVCERVLDRCLAPSIAVGEGCDNMTMILVQFKKPVQSNAPAQEQSSSNEQARLESSAS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi911g00008 357 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Sebi911g00008 357 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Sebi911g00008 357 SMART PP2C_4 13 328 IPR001932 -
Sebi911g00008 357 PANTHER PROTEIN PHOSPHATASE 2C 18 329 IPR015655 GO:0004722|GO:0006470
Sebi911g00008 357 CDD PP2Cc 23 330 IPR001932 -
Sebi911g00008 357 SMART PP2C_SIG_2 28 330 IPR001932 -
Sebi911g00008 357 MobiDBLite consensus disorder prediction 132 155 - -
Sebi911g00008 357 Pfam Protein phosphatase 2C 157 312 IPR001932 -
Sebi911g00008 357 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Sebi911g00008 357 SUPERFAMILY PP2C-like 4 332 IPR036457 -
Sebi911g00008 357 Gene3D - 1 331 IPR036457 -
Sebi911g00008 357 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi911g00008 Sebi-Chr911 189045 194800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi911g00008 1 342 PP2C-type Phosphatase Gene Family AT2G25070 77.778 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi911g00008 K17499 - gmx:100793667 603.979