Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi90g00049 ATGTTCATTAATTATGAAAGAGAAAGACATGCTATCATAAAAGTGACAACTAACAAAAAGCAAAGGACAAACTTTGACCCAAGTTCCAATGGCTTTGGGACCAATTTCACACCGGCAAAGAACTTGACACATATTATTGCCTTTAAGGTGTTATTGTATACATATATGGGAGATACAGAGAGTTGCAGTAGTAGAGCTTTCAATTCTGGATTGAATCATGATCGATTGCAGAGTCTGAAGGCTGGGGTTTACCACGAGATTCTTAGTCGGCTTAAGGAATTGAATGCCCCAGAGGTTATGGTTCCTGATTTTGAAGATGAACTTTGGGTCCATTTTTATCGCCTTCCCACTAGGTATGCACTGGATTACATGAAGGTGGAGAGGGCCCAAGATGTTCTTATGCATAAAAGGTTACAGCATATGGCACGAGCTATTGCTAGTAGACCTGCAGTTGAAGTTCGTCTTGTGCAGGTTCGTTCTGCTTCTGGTGTGCATTCTAGCACTTCCCTTCTTTCGAACTTACAAAGAGAAATCAGTCCTCAAGATTCTGATATTCCCAGCAACATAAGGTCAATGCATGAAATTACAATCTCAACAAACGATAAGCCAAAACTTTTCAGTCAGTTAACTTCCTTACTATCTGAGACTGGGCTGAACATTCAAGAAGCACATGCTTTTTCCACGCTCGATGGATATTCATTGGATGTTTTTGTTGTTGATGGTTGGGCAGTCGAGGAGACTGAGAAGTTAAAACATGAATTGACAAAGAAAATGTTGACACTCCAGGAGACTGAGATGCTAAAACATGTTCCAACAAAGAAAATTAAGAAACTTGAGACGCAGCCTGGGTGCAGTCTTCCTAAGGAGAACCATGAGCAAGCTGGTATCAACTGCTTCTATAACCATGCAGACATGCCCAACAGTGAAAACTATGTTTGGGAAATAAATGCAAGCTGTTTAAGATTTGAAAAGCAAATTGCATCTGGATCTGTATGTGATTTGTATAAAGGTTTTTACTGTAATCAAGATGTGGCTATCAAAGTCTTTAAGGATGGTTGTCTGAATGAAGATGCAAAGAGGGAGTTTGCACAGGAAGTCGATATCCTGAGTAAAATTCAGCACAAGAATGTTATCAAATTTATTGGTGCCTGTACAAAGCCAAACCTTTATCTCGTCACAGAGTATTTGTCTGGTGGAAATATGTATGAATTTCTGCATATACAGAAAGTCATCCTTACCCTTCCATCTTTGCTCAAAGTAGCAATTGATGTTTCTGAAGGAATGAATTACTTGCATCAGAGAGATATTATACATAGAGACCTCAAAGCTGCTAATCTTTTAATGGATGAGAAATGGTTCAAGATACCTATGAATAATGGACCCCTACATCCTCTTCCTTGGGATCGTAGCAATGTTGATCTCTATCCACCTGGGTTTGATGACACATCAAGTGAAGAGGATGATATCAGTACTAATATGGATGATGAGGAAACAGTCGGGGTAGTTATCCAGAACCAACCTGGTTCAGAAACTCTTGAGCATGTTACTTATAGCCCACCCCAACCAAGTGAGGAGCTACTTCCACCATCGGTAATTGGTGCCAATGTTTACCATGGAGATCAAATATTGTGGGCGAATACACTTTCAGATGCTTCATCAACTGGAAAACAAGCATTGATGGGACCACTCAATCCTGGTGTTTTATATGGACAAGCACTCAGTGTCGGATTGGCCATGGATGGTACGAGTATTGCAAATCTAGTGGATGTAAAAAAAAATGACAAACTGATCTTCTGGAAGGATGAAGGAGACACAATGATACGCCTTAAATATGAACGCGATTGA 1845 0.3995 MFINYERERHAIIKVTTNKKQRTNFDPSSNGFGTNFTPAKNLTHIIAFKVLLYTYMGDTESCSSRAFNSGLNHDRLQSLKAGVYHEILSRLKELNAPEVMVPDFEDELWVHFYRLPTRYALDYMKVERAQDVLMHKRLQHMARAIASRPAVEVRLVQVRSASGVHSSTSLLSNLQREISPQDSDIPSNIRSMHEITISTNDKPKLFSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVDGWAVEETEKLKHELTKKMLTLQETEMLKHVPTKKIKKLETQPGCSLPKENHEQAGINCFYNHADMPNSENYVWEINASCLRFEKQIASGSVCDLYKGFYCNQDVAIKVFKDGCLNEDAKREFAQEVDILSKIQHKNVIKFIGACTKPNLYLVTEYLSGGNMYEFLHIQKVILTLPSLLKVAIDVSEGMNYLHQRDIIHRDLKAANLLMDEKWFKIPMNNGPLHPLPWDRSNVDLYPPGFDDTSSEEDDISTNMDDEETVGVVIQNQPGSETLEHVTYSPPQPSEELLPPSVIGANVYHGDQILWANTLSDASSTGKQALMGPLNPGVLYGQALSVGLAMDGTSIANLVDVKKNDKLIFWKDEGDTMIRLKYERD 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi90g00049 614 FunFam Kinase suppressor of Ras 1 309 396 - -
Sebi90g00049 614 ProSiteProfiles Protein kinase domain profile. 320 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi90g00049 614 SMART serkin_6 320 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi90g00049 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Sebi90g00049 614 SUPERFAMILY ACT-like 191 257 IPR045865 -
Sebi90g00049 614 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 172 452 - -
Sebi90g00049 614 Gene3D Phosphorylase Kinase; domain 1 311 394 - -
Sebi90g00049 614 Gene3D Transferase(Phosphotransferase) domain 1 395 498 - -
Sebi90g00049 614 SUPERFAMILY Protein kinase-like (PK-like) 309 452 IPR011009 -
Sebi90g00049 614 Coils Coil 244 264 - -
Sebi90g00049 614 Pfam Protein tyrosine and serine/threonine kinase 320 451 IPR001245 GO:0004672|GO:0006468
Sebi90g00049 614 ProSiteProfiles ACT domain profile. 194 269 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi90g00049 Sebi-Chr90 1465420 1480683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi90g00049 56 450 MAP Kinase Kinase Kinase AT4G38470 48.506 2.75e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi90g00049 PK_Tyr_Ser-Thr 7.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi90g00049 - - gmx:100818047 462.611