Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi90g00046 ATGAGAGTTCAATCAGAGGAGGAGTATGATGATTATGATGATGAGGAAGAGAAGGAGGAGGAGGATGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGGGGATAATGTATATGTACACGGTGATGAGAGTGAGGATGATGAGGACAATGAACATAGTGGTGATGAGGGTTCTATTCATTTTGGTGATGAGGATGATGCACGTCAAAGTGAGTATGCAGGCGTAGGAATGAGTATCAATGATTTGGAAGATATGAAGAAAATAGATATGAAGACCATTAGTTGTGAAGAGATTACTAAATGTGACTTTGCGGAGTTGGAACTTGGGTATGTCTTTTACTGTAAGTATGCAATTAAGAAAGGTTTTGCTGTCCGAAAAGGAAAGGTGGTTAAGAACACAACAGGTGAAATTGTTCAGAGGACATTGTTTTGTAATAGGGAAGGGAAAAGACAACGCAATAATCAAAAGAAGCGGGAACCAAGACCTGAAACTAGATGTGGTTGCCATGCTTTATTAACTCTTCGTATTGACTTTATCACTGGTCGATGGTTTGTGAAAGACCTCAATGATGATCACAATCATGATATGTTAGAAGAAAAGTACTATCGAATGATGGCAGCTAATAGGAAAATGACTGAGTCGGACTTAATGGAAATGAACAGCATGAGAAGTGTAGGGATAAGTGTACCTGACATATATGCATCATTTGCAAGACGTTGTGGAGGTTATGACAAGTTTATAAAATCTCGTTACAACCTCACCGAGTTTGTTCAACACTTTCAACGTTGTCTTTGCTATGTGCGATACAAAGAAGAGGAGGATGACTTTGCATGTATCTTGGGTGAGGCAGTATTGAGAACAAATTTTCAGCCATTGGAACGGTCGGCTTCCAGACATTTCACAAGGAATATATTCTTCATATTTCGCAAGGTCTTATTTAGCGCTGCACAGAACTTTGTTGTTGGTTGCAGGGAGTCAGAGATGTGGAACATTTACACTATAAGGAGGTATCAAAGTGGTGGGAAAGAATGGTTTGTGTCTTTGTATCCACCAACAGAAGAATTCAAATGTTCATGTCAGCGTATGGAGTCATATGGCTTACCCTGCCCCCACATTGTACGTGTTTTGGTGTACCTAGATTATGGTGAACTTCCTCAAAGTTTAATACTTGAGAGGTGGACCAAACGGGCTAAGGACTCAATTCGTAAGATGTTCATTAGTAGCTCACACTATTGGGACTCACCATTGATAGCCTGTTATGCTGCAATGTTAGAGCAGTGCATAGAGTTATGTAATCTAGCTGCTCGATATGATGAAGAGTTTACTCGTATTAGGGAATGGATAACTTCAGAAATACAATGTTTGAAGGAGAAATATGGAGAAAACGTTCTTCAACAACTTGATGATGGCGTAGAAATGGATGGTAGAAGAAAGAACAAGTGCAGCCAATGTGGAGGGATAGGACATAATAAAAAATGTTGTCCTCAAGTATGTGCCCCAAGGGGTGCTGGTAGCACATTTGCAGCAAGTGGACATGAAGCTGGAAGTCAGCCTAACTTCGGGCTCTTTGTGGATTTGCAATTAGGTTCTCCAATAACACAGCAGACCCAACATACTTCTGAGGGAATGGAACATGGACATGAGGAACGGGCTTGA 1656 0.4058 MRVQSEEEYDDYDDEEEKEEEDEEEEEEEEEEEGDNVYVHGDESEDDEDNEHSGDEGSIHFGDEDDARQSEYAGVGMSINDLEDMKKIDMKTISCEEITKCDFAELELGYVFYCKYAIKKGFAVRKGKVVKNTTGEIVQRTLFCNREGKRQRNNQKKREPRPETRCGCHALLTLRIDFITGRWFVKDLNDDHNHDMLEEKYYRMMAANRKMTESDLMEMNSMRSVGISVPDIYASFARRCGGYDKFIKSRYNLTEFVQHFQRCLCYVRYKEEEDDFACILGEAVLRTNFQPLERSASRHFTRNIFFIFRKVLFSAAQNFVVGCRESEMWNIYTIRRYQSGGKEWFVSLYPPTEEFKCSCQRMESYGLPCPHIVRVLVYLDYGELPQSLILERWTKRAKDSIRKMFISSSHYWDSPLIACYAAMLEQCIELCNLAARYDEEFTRIREWITSEIQCLKEKYGENVLQQLDDGVEMDGRRKNKCSQCGGIGHNKKCCPQVCAPRGAGSTFAASGHEAGSQPNFGLFVDLQLGSPITQQTQHTSEGMEHGHEERA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi90g00046 551 MobiDBLite consensus disorder prediction 8 52 - -
Sebi90g00046 551 Pfam FAR1 DNA-binding domain 112 197 IPR004330 -
Sebi90g00046 551 Pfam SWIM zinc finger 356 377 IPR007527 GO:0008270
Sebi90g00046 551 Coils Coil 2 36 - -
Sebi90g00046 551 ProSiteProfiles Zinc finger SWIM-type profile. 332 380 IPR007527 GO:0008270
Sebi90g00046 551 MobiDBLite consensus disorder prediction 1 66 - -
Sebi90g00046 551 SMART 26again6 355 382 IPR006564 GO:0008270
Sebi90g00046 551 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 244 434 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi90g00046 Sebi-Chr90 1453795 1456390 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi90g00046 FAR1 2.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi90g00046 - - tpra:123886262 208.764