Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi90g00035 ATGGGATTGGGGCTCTTTAAGGCGTTATTTTGCTGTACCAATTCCCATGACATTCCCATTGCCTCTTCAGATTCCTCTCCTAAACACACCTACACACAATCCAGAAAAACCAGACCAATGCCAAGTCCATCTCCTCCCCGTCCCAGACACACCCAATCATCAAAAAAAGGACAAATTTTGGGGAAACCTTATGTTGACATAAACCAAATATACGAGATGAAGAAAGAATTGGGAAGGGGTCAATCTGGTGTTACTTATTTGTGTGTAGAGAGGAGAACAGGGAGAGAATACGCGTGCAAATCTATTGCAAGAGCGAAGCTATTGAATGAGCAAGAGATTGAGGATGTGAGAAGAGAGGTTATGATTCTTCAGCATCTTTCAGGGCAACCAAATATAGTGGAATTCAGGGGAGCTTATGAGGATAGGCAGAATGTGCATTTGGTGATGGAGTTGTGTAGTGGGGGTGAACTGTTTGACCGTATTATTGCTAAAGGGAACTATTCAGAGCGTGAAGCAGCCACAGTCATGAGACAAATTGTTAATGTGGTTCATGTTTGTCATTTCATGGGTGTAGTGCATCGTGACCTCAAGCCAGAGAATTTCTTGTTGGCTACAAAGGAGGAGAATGCTGCAGTAAAAGCTACTGATTTTGGACTATCCATTTTCATTGAAGAAGGTTAG 681 0.4258 MGLGLFKALFCCTNSHDIPIASSDSSPKHTYTQSRKTRPMPSPSPPRPRHTQSSKKGQILGKPYVDINQIYEMKKELGRGQSGVTYLCVERRTGREYACKSIARAKLLNEQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQIVNVVHVCHFMGVVHRDLKPENFLLATKEENAAVKATDFGLSIFIEEG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi90g00035 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Sebi90g00035 226 Pfam Protein kinase domain 71 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi90g00035 226 PANTHER SERINE/THREONINE-PROTEIN KINASE 63 222 - -
Sebi90g00035 226 MobiDBLite consensus disorder prediction 22 38 - -
Sebi90g00035 226 MobiDBLite consensus disorder prediction 22 58 - -
Sebi90g00035 226 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Sebi90g00035 226 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Sebi90g00035 226 SMART serkin_6 71 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi90g00035 226 ProSiteProfiles Protein kinase domain profile. 71 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi90g00035 226 FunFam Calcium-dependent protein kinase 1 73 156 - -
Sebi90g00035 226 SUPERFAMILY Protein kinase-like (PK-like) 71 224 IPR011009 -
Sebi90g00035 226 Gene3D Transferase(Phosphotransferase) domain 1 157 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi90g00035 Sebi-Chr90 1162104 1162784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi90g00035 27 226 EF-hand Containing Proteins AT4G04720 62.439 1.58e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi90g00035 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi90g00035 K13412 - gmx:100816157 350.903