Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi90g00018 ATGGATGATCTGTATGAAGTTCCAATATATAATTTGGATTATGACAAAGATATGGGAAACGATGTTGGTTCTAATGATAGTGTTAGTGGAGATTGTACTAATAATGATGAAGCAAATGATAATGGTAATAGAGAACCTAGTAAAAATGGAGATACCCATAATAATGATGAAAGAAATGAGCCACCAATGGTTGATGTTGGAGCTCACAGATTTGTGATAAGGAAAGATGAGATAAAAAAGGATGTTAGGGGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGATTGAGGAACAAAAGGCATTTGATGAGGTTAGATCGAAAAAGGGATCATAGAGCAATCACTCGCACTAATTGTGAAGCTAAATTACGAATACGCTTCAATCGAAAGAAAAAAAATTGGAGAGTGGTGTCCTTTGAGGAGTCTCATAACCATGAGCTAACCCCACCTAGGTTTGTGCATTTACATTCTGCATATCATAAATTGACGGATGGAGATAAGGCTCAAGTGGATAGCTTACATGCTCATGGTGTGAGAACGGGTCACATTATGGGTTACATGTTGGCTCAAAAAGGGGGGTACTGTAATGTAGGGTTTGCAAGAAAGGATGTGTACAATTATATTTACATCAATAATCGTGTCAAGATAAAAGATGGAGATGCACTTGCTGCATTAAGTTATTTGAAAGGCAGGGCAGCACATGATCCCACACTGTTTGCAGAATTTAGGGCTGATGACAAAGTCTTGACTACTTGTCTGCACAAAATTGATAAAGAAACTGCAAAAATTTATACACTAGAGATGTTTAAAGAAGTTCGGCAAGAAATAGATAAGGCTGGTGCATTAATTGTTATTGATCGAGCAGTAAACAGGCAAAAGTTGGGTTTCACACTAAATAGTCGTGGCATTCCATGCTCTCATATTTTCTGTGCAATGAAAAATGAGCATGTAGACTTTATTCCTAGCAGTTTGATTTTGAAACGTTGGACAAAGAATGCTAAAAGTGATCTTATTTCCTCTTATCGGGTTGATGAAGTACATTCTAATGTGTTGGCTGCTGCTCAGATATCAGCCTTATCTGCCTATTGTAACAACTTTGTTAGGGTTGCTTATGAAAAGACATGGTGTTTTGGTGAGATAGTAGATGACATTTTTAATCTTCAGTTGAAGTATGAGAAGAAGGGGGATCCAAGTAGCACATCCTCATCAGCAAGGAAAATCGGTGATCCCACTGTGGTTAAAACTAAAGGTGCTCCTAAAAAAAGAAAGTTTAGCAAGAAAAGAAAGAGACATTGTTCAAATTGCTCAGGCACAGGACACACAATTAGGACATGTCCTAAAGTTGGTGGTATAGATGTTAAGGCTGACAGTGATAATGAGACTTCACCTTCAGAGAGGAGTGACAATAACAAATCAAATGACAATGACAAAAATGAAATGGAATTTGATGTATCTAACACTCAAGTCCCTGTACCTTCACAAAATTCCAGTGGGCGAAACATTAAAAAAGGGAAGGAGAAGGAGAAGGTTGATCCTGTTAGCACTAGTAAGGTGAAAAAGGTAAAGGAGATCAAGGAAAAAACTCAAGTCAAAAACAGGAGAATGAAGTTGTAA 1620 0.3747 MDDLYEVPIYNLDYDKDMGNDVGSNDSVSGDCTNNDEANDNGNREPSKNGDTHNNDERNEPPMVDVGAHRFVIRKDEIKKDVRGNIVMRQFVCNREGLRNKRHLMRLDRKRDHRAITRTNCEAKLRIRFNRKKKNWRVVSFEESHNHELTPPRFVHLHSAYHKLTDGDKAQVDSLHAHGVRTGHIMGYMLAQKGGYCNVGFARKDVYNYIYINNRVKIKDGDALAALSYLKGRAAHDPTLFAEFRADDKVLTTCLHKIDKETAKIYTLEMFKEVRQEIDKAGALIVIDRAVNRQKLGFTLNSRGIPCSHIFCAMKNEHVDFIPSSLILKRWTKNAKSDLISSYRVDEVHSNVLAAAQISALSAYCNNFVRVAYEKTWCFGEIVDDIFNLQLKYEKKGDPSSTSSSARKIGDPTVVKTKGAPKKRKFSKKRKRHCSNCSGTGHTIRTCPKVGGIDVKADSDNETSPSERSDNNKSNDNDKNEMEFDVSNTQVPVPSQNSSGRNIKKGKEKEKVDPVSTSKVKKVKEIKEKTQVKNRRMKL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi90g00018 539 PANTHER OS01G0519700 PROTEIN 300 429 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 22 40 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 502 532 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 460 483 - -
Sebi90g00018 539 SUPERFAMILY Retrovirus zinc finger-like domains 422 451 IPR036875 GO:0003676|GO:0008270
Sebi90g00018 539 MobiDBLite consensus disorder prediction 41 64 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 396 539 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 15 64 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 484 501 - -
Sebi90g00018 539 Pfam FAR1 DNA-binding domain 71 150 IPR004330 -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 396 410 - -
Sebi90g00018 539 MobiDBLite consensus disorder prediction 419 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi90g00018 Sebi-Chr90 644572 647254 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi90g00018 FAR1 3.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi90g00018 - - ccaj:109792835 246.514