Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi90g00015 ATGATTCTCTTTATGAATCTCCCTTCTTCTCGTGCACCTTTTCTTCCGACTTTAATTTGCACAACACTTCTCCGATTGACACTATTATTTGCTATTTCCAGCAAAACAAAGGCTCTTGTGAAACTGCCACCAAATGTTACATTTCCAGCAGTGTTGGTGTTTGGAGATTCTATCATGGATACGGGCAATAACAACAACATGAAAACTCTAGCTCGGTGCAATTTCGAACCATATGGTAAAGATTTTCAGGGAGGGACCCCAACTGGCAGATTTAGCAATGGAAAAGTTTCATCCGACATTGTAGTTGAAGAATTAGGCATTAAAGAACTTCTACCAGCATATTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACAGGTGTTTGCTTTGCATCCGGTGGCGCCGGATACGATCCATTCACAGCACAATTAGAGTCAGCTATACCTATATCCGGTCAGCTAGACTTATTCAAAGAATACATAGGGAAGCTAAAAGGACTAGTTGGAGAGGAAAGAACAAACTTCGTCCTAGCCAACAGTTTTTATCTTGTGGTATTGGGCAGTAATGACATTTCCAACTCATACTTCTTGTCTGGCATTAGACAAAAGCAATATGATTTTCCTACTTACGCTGACCTTATGGTCAGCTCAGCTTCTAATTTCTACAAGGAATTATATGAACTAGGCGCACGGAGGATTGGAGTATTCAGTGCGCCGCCGATTGGATGTGTGCCGTTTCAGAGAACAATGGCCGGAGGAATAGTAAGAAACTGTGTGGATAATTACAACGATGCAGTGGTGTTATTTAACAGCAAACTATCAAAGGAGATCGATTCCATTAATCAGAACCTTCCAGATAGCAGGATTGTTTACATTGATGTTTACAACCCTCTGCTTGATATCATTGTAAACAACCAAAAATATGGCTATACAGTCGGAGACAGAGGGTGCTGTGGCACAGGCACTATTGAGATTGAGGGGTCACCAATGGAGAATCATGGGTATGATAAACCCGACCCAGGATGTGTGCATCTCTTGGTTCATTTTGTTGGAAAAACGGAAGAAACTAAACCACTATTGAATATTGATCCTGACCGATACTCATATATTGACTTTGTTGGTGATGTTTGCGGGTTAGCCAATGCTGGTGGGTGCCAACATGCGAATTTGCCTTTTGCCCTTTCTTTTTGTCATCCAGGTAGCCATTCAAGAATCCCCATTAACACTGAATATGATGTTCTTGACATGTTTAGGCTTAATAGTACGTGTATTTGCATCCATGTGTATGGCACCTCACTAAATTATAAGGACACTGAAGTTGGAATTAGTGATTCTAATAAGGGGACTAATAATTGTGATGCACCTGAAGTAGTAATCAGTGAGTCTGATGATGAGTGGAGAAAGGGGGGTGAATCTCAACAAGACGAAAGTGAAGGAATTGAGTCAGATGCTAGTTATATAGATGTGGAGGAAAGAAAAAATGAGGATAGTAATGATGAGTTGAGTGATTATGAAGAAAAGTATGACCTTATTAATTCTGAGAATTCTGATGAAGATAAGGTGCCAATTTATTTTGACAGAGGTATAAAAGGAAAGTTATTTGTTCATGAGCCTGATGGAAAGGTGAAATTAGAAGTTGGTTTATTGTTTCTTGATGTTAATGAGTTTAGAGCAGCCTTGAGAGACTTTGTTATACTGGAGGGGTTTGAGATTGAGAGGATTAAAAATGAAAAAGCTAGGGTAACAGCTAGATGTGCAGCAGATGGCTGTTCTTGGCGTATCCATGCCTCCCCTACACCGGATTGGAAAACATATAAGATTAAGACATATAACCCGGTACATTCTTGCATTAGAACATCCAAGAACTCAAATGCCACATCTACTTGGATTGCAACAAAGTTAGAAAAACCAAGTAATGTAATTCAACTTTATCGAGCAAGACAAAGGGTGAGACAAGATAGCAAAGGGGCTCATGCAATTTCATATAATGACTTGCCAGCTTGGGCTAACCTTGCAAAGGAGACAAACCCTGGATCATTAATAAAGTTAGAGTTAGAACCTAGGATCAACAAAAATCCAGAGTTTAAAAGTTCTGTTCCTGAATGGCGGGATAGACAAGTCACAATCATGTCAGATATGCAAAAGGGGTTGCGAAATGCAGTTGTAGAGACGTTTCCTTATGCCAAACATAGGTATTGTTGTAACCATTTGCTAAACAATTTCAAGTTGAATTTTAGAACCTTGATTCTTAGCACACAATTTTGGGCTGTTGCAATGGCTTTTAATGAGTTTGTGTTTGAGAAAGCTTTAGACAAACTCAGAAAAATGAGTAATGAAGCTGCAAATTGGTTACTAGATCCTGAGAGGCCTAAAAGCATGTGGGCAAGACATACTATTGCCCCTGAGTGTAAATCTGATCATGTAACAAACAATGTGTGTGAGTCTTTTAATAGCTGGTTGGGAGATGATAGAAAGAAGACAATTTTGTCCATGCTTGAGAGTATTACTTGTAGGTTGATGGGCAGATTTCAAAGGAGGTATGAAAAAGGATGTGGGTTTGAAAACATTATCACACCTAAGATCAGAAAGATGCTTGATATTACAATGCAAGATGGAAGAGTGTGTAGAGTCACATATGCAGGTGATGATGAGTTTCAAGTGAAAGACGGGTTTACCACCTTTGTGGTGAACTTAAGGACTAGAACGTGTGGTTGTAATTATTGGATGCTATCTGGTTTACCATGTAAGCATGCATGTGCATGCATTGCCTACAAGAGAGCAAATGTGGAGATGTTTTGTGATAATGCTTACAGTACTAAAATTTACTGTTTATCTTACACTGAGATAATACACCCTATGCCGGAATTGGATATCAACAATAGAGGTTGCTATGGGAAAATTGATCCTCCTACGTTGAGAAGGCTACCGGGAAGACCAAGGATTAATAGGAAGAGAAGTGTGATTGAAGGTGCAGCTGGTCCACATGATGCAAGAAGATCAAACACAGTTAAATGTGGAAACTGTAAGGAGTTTGGACACAATATTTTGGGATGTCAAAGAGATAAAACCAAAAGACAGAAAAAGCTAAAGGTCAAACGTGGGAACCATAATGATGCTACAAATACTACTTGCTCTAGGAAGAAGCAACAACAAACTGTCAATGAGGGATATGGAACCTCAGATCAAGCAATGGCTTCTTCAAATTATGGAACTTCAAGCCAAGCCACTCATGGAAATGCACCCAATCTAAGCCAGGTGTTCATAAGCAGTCAAGTCACTGAGGAAAATGGTTCTTGA 3297 0.3958 MILFMNLPSSRAPFLPTLICTTLLRLTLLFAISSKTKALVKLPPNVTFPAVLVFGDSIMDTGNNNNMKTLARCNFEPYGKDFQGGTPTGRFSNGKVSSDIVVEELGIKELLPAYLDPNLQPSELATGVCFASGGAGYDPFTAQLESAIPISGQLDLFKEYIGKLKGLVGEERTNFVLANSFYLVVLGSNDISNSYFLSGIRQKQYDFPTYADLMVSSASNFYKELYELGARRIGVFSAPPIGCVPFQRTMAGGIVRNCVDNYNDAVVLFNSKLSKEIDSINQNLPDSRIVYIDVYNPLLDIIVNNQKYGYTVGDRGCCGTGTIEIEGSPMENHGYDKPDPGCVHLLVHFVGKTEETKPLLNIDPDRYSYIDFVGDVCGLANAGGCQHANLPFALSFCHPGSHSRIPINTEYDVLDMFRLNSTCICIHVYGTSLNYKDTEVGISDSNKGTNNCDAPEVVISESDDEWRKGGESQQDESEGIESDASYIDVEERKNEDSNDELSDYEEKYDLINSENSDEDKVPIYFDRGIKGKLFVHEPDGKVKLEVGLLFLDVNEFRAALRDFVILEGFEIERIKNEKARVTARCAADGCSWRIHASPTPDWKTYKIKTYNPVHSCIRTSKNSNATSTWIATKLEKPSNVIQLYRARQRVRQDSKGAHAISYNDLPAWANLAKETNPGSLIKLELEPRINKNPEFKSSVPEWRDRQVTIMSDMQKGLRNAVVETFPYAKHRYCCNHLLNNFKLNFRTLILSTQFWAVAMAFNEFVFEKALDKLRKMSNEAANWLLDPERPKSMWARHTIAPECKSDHVTNNVCESFNSWLGDDRKKTILSMLESITCRLMGRFQRRYEKGCGFENIITPKIRKMLDITMQDGRVCRVTYAGDDEFQVKDGFTTFVVNLRTRTCGCNYWMLSGLPCKHACACIAYKRANVEMFCDNAYSTKIYCLSYTEIIHPMPELDINNRGCYGKIDPPTLRRLPGRPRINRKRSVIEGAAGPHDARRSNTVKCGNCKEFGHNILGCQRDKTKRQKKLKVKRGNHNDATNTTCSRKKQQQTVNEGYGTSDQAMASSNYGTSSQATHGNAPNLSQVFISSQVTEENGS 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi90g00015 1098 ProSitePatterns Transposases, Mutator family, signature. 712 736 IPR001207 GO:0003677|GO:0004803|GO:0006313
Sebi90g00015 1098 ProSiteProfiles Zinc finger SWIM-type profile. 894 926 IPR007527 GO:0008270
Sebi90g00015 1098 Pfam GDSL-like Lipase/Acylhydrolase 51 322 IPR001087 GO:0016788
Sebi90g00015 1098 FunFam GDSL esterase/lipase APG 40 334 - -
Sebi90g00015 1098 Gene3D SGNH hydrolase 41 371 IPR036514 -
Sebi90g00015 1098 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Sebi90g00015 1098 MobiDBLite consensus disorder prediction 1022 1081 - -
Sebi90g00015 1098 MobiDBLite consensus disorder prediction 444 484 - -
Sebi90g00015 1098 MobiDBLite consensus disorder prediction 1036 1081 - -
Sebi90g00015 1098 CDD SGNH_plant_lipase_like 49 324 IPR035669 -
Sebi90g00015 1098 PANTHER GDSL ESTERASE/LIPASE EXL3 30 325 - -
Sebi90g00015 1098 MobiDBLite consensus disorder prediction 460 475 - -
Sebi90g00015 1098 Coils Coil 487 514 - -
Sebi90g00015 1098 Pfam MuDR family transposase 542 607 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi90g00015 Sebi-Chr90 553236 560897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi90g00015 19 318 Pollen Coat Proteome AT1G75910 41.447 1.11e-62 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi90g00015 - - vvo:131650408 572.778