Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi909g00004 ATGAGAGGCGGCGGCGGAGGCGGAGAGATCGTGGAGGTGCAAGGAGGGCACATTGTTCGGTCGACGGGGAGAAAGGACCGTCACAGCAAGGTATGCACCGCGAAAGGCCCACGAGACCGCCGAGTGAGGCTTTCGGCCCACACCGCGATCCAATTCTACGACGTGCAGGACCGATTGGGCTACGACAGGCCCAGCAAGGCAGTGGACTGGCTCATAAAAAAAGCCAAAGCTGCCATCGACGAACTCGCTGAGCTTCCCGCATGGAACCCCACCGCCACGTGCTCATCTGCACCACAACAACAAGAGTCACAGCAGCAGCAGCAACATCACATGGTCCACCGGCAATCACCGGTGGACGACCCTGTAATTGCTTCAAGTAGCCGCAACGTGGCGGTGGGTGGAAGAATACCAGAACAATTCCCCTCCCTCTCGCAGCAATTGGATAACAACAATACCGATGGTAGTGGGAAATACAAATACAACAGTGGTGGTTCTGGTTTTCTTCCAACGTCATTGGACACAGACATTGCGGATACTATTAAGTCTTTCTTTCCGATGGAGACAGCTACGACGTCGTTTCAGAGCTATGCGCCACCGCCAGATTTGTTATCACGAACAGCAAGCGGTGGTAGCCAGCAAGATCTGAGACTCTCATTGCAGTCATTTCAGGACCCTATTTTACTTCACCATCACCAACAGACTCAGAACCACCATGAACAGTCACCGGCGATGGTGCCGGCGTCGGTGTTTGGCCATGGTCATGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCATTTGGTTCGTGCTTGGATAGACCCTTCCATTGCGACGGTAGCGGATCACCACCATCATCACTACCTCTCGCCGGCGATCCATCAGGCTTCTGTCTCAGGTGCTGGATTTGCTGCCCCTGGTGGCTTCTCCGGCTTCCACATACCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1032 0.5455 MRGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWNPTATCSSAPQQQESQQQQQHHMVHRQSPVDDPVIASSSRNVAVGGRIPEQFPSLSQQLDNNNTDGSGKYKYNSGGSGFLPTSLDTDIADTIKSFFPMETATTSFQSYAPPPDLLSRTASGGSQQDLRLSLQSFQDPILLHHHQQTQNHHEQSPAMVPASVFGHGHGQYFSQRGPLQSSNTHLVRAWIDPSIATVADHHHHHYLSPAIHQASVSGAGFAAPGGFSGFHIPARIQGEEEHDGVSDKPSSASSDSRH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi909g00004 343 MobiDBLite consensus disorder prediction 19 38 - -
Sebi909g00004 343 MobiDBLite consensus disorder prediction 1 38 - -
Sebi909g00004 343 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Sebi909g00004 343 MobiDBLite consensus disorder prediction 90 112 - -
Sebi909g00004 343 Pfam TCP family transcription factor 23 126 IPR017887 -
Sebi909g00004 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 298 IPR005333 GO:0003700
Sebi909g00004 343 MobiDBLite consensus disorder prediction 90 122 - -
Sebi909g00004 343 MobiDBLite consensus disorder prediction 136 160 - -
Sebi909g00004 343 MobiDBLite consensus disorder prediction 322 343 - -
Sebi909g00004 343 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi909g00004 Sebi-Chr909 200849 202072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi909g00004 4 343 TCP Transcription Factor Family AT1G53230 44.140 6.01e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi909g00004 TCP 6.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi909g00004 - - aip:107630075 350.517