Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi908g00019 ATGGCACCAACAAGGAAATCTACTAGTGTGAATAAGCGGTTTTCAAATTCAAATGACTTTTCTCCCAAGAAAGAGAAAGATGAAGTTAACTCAAATAAAAACAAGCAACGAAAGAAAAGGTTGTCTGATAAATTGGGACCTCAGTGGAGTAAGGAGGAACTAGAACGATTTTATGAAGCATATAGGAAGTATGGGAAAGAGTGGAAAAAGGTGGCTACCGTTTTACGTGATAGATCCGTTGAAATGGTGGAAGCTCTATACAATATGAATCGGGCATACCTTTCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCATCATAATGTCCTGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTGAAACGAAAGCGTGAAAAAGTTCAACTAAGTGTTTCAAAAGATCCTGTTCAGTCTCAGTCAATTGCTTCCCCCGATGGTTGCCTCTCTCTACTAAAGAAGAGACGCATTGATGGTATCCAGCCTCGGGCTGTTGGGAAAAGGACACCCCGTGTCCCAGTTTACTACTCTTATAAGAAGGATGATAGGGAAAATTATATTTCACCTAATAAAAGAAGCCTGAAGTCAACCATTGATGCTAATGATGATGAAGTTGTAAATGTGGCTTTGGCATTAACCAAAGCTGCACAGAGAGGGGGCTCTCCCCTAGTTTGTCAGACACCATACAGAAGAGCAGAGCAACAGTCTTCTCCTGTACCGAGTGGGGAAAAAATGCGCCAAATGTCAGAGACAGCTCGTGCCAAGTTTCATGATGTCTCTGTTGATGAAGAGTTTGTGGAAGGCAGTATAGAAAGCAGGGAAACTGAAAATGGAGAATATGCCAGAGATACTAGTTCCTTGATGGACATGGAAGGCATGGGCACTGTTGAAGTTCTTCAGAAGGGGGGGAAATTTTACAGAAAGAAAGAGAGAGTGGGAAATGTTGCAAACGATAAGTTTGATGATGGTGGGGAAGCATGTAGTGGCATCGAAGGAGTTAGGTTTAGTTCTTTGAAGGAAAAGGTTGATATTGAGGCTAATAATGAAAAACTTGAGCAATTCTCTCTAAAACATCAGAGGAAAAGAAGCAAGAAACTCTTCTTTGGAGATGAAATTCCTGCCTTGAATGCCTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAACATCTAAAGTAGAATCTGAGTCATCTGTCCAGTTGAAGGGAGAAAGAATGGCTGTTGATAAAGATGATAAGTCTGCCTTACCTGAAGAAACATCAACAAGTCATAACAGATATGAACATAAACTGTGCGTCGTGCCTGGAGTTGAGGCTTCAGCCTCCAAAAAATCTAAACTCGGAAAGGAATCAGGAATTGATACTGATGCTCTCTCTGAATCAAAAGAGAAGCTTCCCCTTGTTGATAGAACATGGAAAAGAAAGCAAAAGTCCATGATTTCAAAGATTTTGAGGACTGATGAGATGACATCAGTGATGATGTTTGATCGTGATCAATTCATCATGGCTGTAGATGATGAGAGCAAACCAGTGATTAAAGGAAAACACACTGATCAGGTTTTTACCCTGCCAAAACAATTGAAGACAGTCAAATCATCAGAGAGTTCCCTGTGTAGTGATCAGAAAGATTTGACAGCATCAACTACAGAAGTTCCACTTTTGAGTGAAGTTAGTTTACCAACTAACCAAGGAAGTAGACGAGAGAGGATTATTCAGAGAACATCCATGCCTAAAGAGAAGTCTTCTGAGAACATATTGAAAAGTCAACCTAACAATGCAATAGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAATACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACAATTTCTAAATGAAGAAAGACAAAAAGTTGAACAGTATCTGGAATCAGTGAGGAAACATTATACTGAACTGTGGACTGGTATTAGAGATGGACTTCCAACAGATTTAGCTAGACCATTATGCGTTGGACAACGAGTAATTGCCATTCACCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACAGTTGACCATGACAAATGCAGGATTCAGTTTGACCATCCTGAATTAGGCGTTGAATTTGTCATGGATATTGATTGCATGCCTTTGAATCCATTAGATAATATGCCAGACGCTCTGAGGGGGCAGATTAATGGAAATTCAAGTTTTGGGGGATGCGAAATGCGTGCTTCACCTCAAAAGTCAGCTAAAGGGATACTTAAAAGGTCTAGTAGGGTTGTGTTGAATCTTCCATCCTTTTCACATGGGTTAGCAATCCAGATTTCCATGGCCACTGGGGATGTTAACTATGCAATTGTCCAGGCAAAGGTTGCTACCATTGATAACCTCTGTCCACAAGCAGCTTGTGCTCAACCGTGTAAGGTTACACACAATCAAGCTAAGGAAGCTGATATACATGCACTTTCTGAACTGAAGCGTGCTATGGATAAAAAGGAGACACTGTTAATGGAGCTTCGAAGTGCAAATAATGGCATACTGGAAAACCAAAATGGCATAGAATGCTTAAAAACTTCCGAGGCGTTCAGGAAGCATTTCGCCACGGTTTCTGATGCTATGCTTCAATTGAGGCAACGCAATACTTACACAGGAAACTCTCTGCCACCATGGATGAAGCCTCAATCAAATTTTAATGTTCATGATGACCTTCCCGGTGTGTTGGATAGTTCTCTAGCACAGGAGTTTGGATCAACTGTCATTGAAATTATTAAAGGATCCAGGCTAAGGGCACATGCAATGGTGGAAGCTGCATTTCAGTCATTGTCTTTGACAAAAGAAGGTGAAGATGCTTTCACAAGGATTGGGCAGGCCCTGGATTGTATTGATTATCAGCGGTCGGCCTCCAAGTCGAGGTTACCTGTGATCAGGTCCCAAGACCAAGTGAATGGCAGTTTTTATTATCATAATCAGTCAACTAGCTGTGCATCAGAGGCTTTACTCAATGATGCATCTGGTCCAAAACTGCATAATGATTCCAACAAAGTTAATGCTAAAATTCCATCAGAGCTCATCACTTCATGCGTTGCTACATTAATCATGATACAGACTTGTTCTGAACGGCAATACCCTCCAGCTGATGTGGCCCAGATATTAGATTCTGCCGTTACCAGCCTGCATCCGTGCTGTCCTCAAAACCTTCCTGTTTATAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCTACTTGA 3354 0.4144 MAPTRKSTSVNKRFSNSNDFSPKKEKDEVNSNKNKQRKKRLSDKLGPQWSKEELERFYEAYRKYGKEWKKVATVLRDRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHHNVLEGSDSERESNDAPGSRKPVKRKREKVQLSVSKDPVQSQSIASPDGCLSLLKKRRIDGIQPRAVGKRTPRVPVYYSYKKDDRENYISPNKRSLKSTIDANDDEVVNVALALTKAAQRGGSPLVCQTPYRRAEQQSSPVPSGEKMRQMSETARAKFHDVSVDEEFVEGSIESRETENGEYARDTSSLMDMEGMGTVEVLQKGGKFYRKKERVGNVANDKFDDGGEACSGIEGVRFSSLKEKVDIEANNEKLEQFSLKHQRKRSKKLFFGDEIPALNALQTLADLSLMMPTSKVESESSVQLKGERMAVDKDDKSALPEETSTSHNRYEHKLCVVPGVEASASKKSKLGKESGIDTDALSESKEKLPLVDRTWKRKQKSMISKILRTDEMTSVMMFDRDQFIMAVDDESKPVIKGKHTDQVFTLPKQLKTVKSSESSLCSDQKDLTASTTEVPLLSEVSLPTNQGSRRERIIQRTSMPKEKSSENILKSQPNNAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEQFLNEERQKVEQYLESVRKHYTELWTGIRDGLPTDLARPLCVGQRVIAIHPKTREIHDGSVLTVDHDKCRIQFDHPELGVEFVMDIDCMPLNPLDNMPDALRGQINGNSSFGGCEMRASPQKSAKGILKRSSRVVLNLPSFSHGLAIQISMATGDVNYAIVQAKVATIDNLCPQAACAQPCKVTHNQAKEADIHALSELKRAMDKKETLLMELRSANNGILENQNGIECLKTSEAFRKHFATVSDAMLQLRQRNTYTGNSLPPWMKPQSNFNVHDDLPGVLDSSLAQEFGSTVIEIIKGSRLRAHAMVEAAFQSLSLTKEGEDAFTRIGQALDCIDYQRSASKSRLPVIRSQDQVNGSFYYHNQSTSCASEALLNDASGPKLHNDSNKVNAKIPSELITSCVATLIMIQTCSERQYPPADVAQILDSAVTSLHPCCPQNLPVYREIQMCMGRIKTQILALIPT 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 1 17 - -
Sebi908g00019 1117 ProSiteProfiles SANT domain profile. 44 81 IPR017884 -
Sebi908g00019 1117 Pfam DIRP 608 705 IPR033471 -
Sebi908g00019 1117 CDD SANT 49 83 IPR001005 -
Sebi908g00019 1117 Gene3D - 2 101 - -
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 1 46 - -
Sebi908g00019 1117 SMART sant 45 93 IPR001005 -
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 18 46 - -
Sebi908g00019 1117 SUPERFAMILY Homeodomain-like 44 92 IPR009057 -
Sebi908g00019 1117 PANTHER LIN-9 608 1117 IPR010561 GO:0006351|GO:0017053
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 410 437 - -
Sebi908g00019 1117 Pfam Myb-like DNA-binding domain 48 83 IPR001005 -
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 117 146 - -
Sebi908g00019 1117 Coils Coil 850 870 - -
Sebi908g00019 1117 SMART DIRP_2 608 706 IPR033471 -
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 117 159 - -
Sebi908g00019 1117 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi908g00019 Sebi-Chr908 229883 242440 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi908g00019 DIRP 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi908g00019 - - gmx:100789533 1573.53