Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi907g00010 ATGGGGTGTTTCACTATCTTCATGTCCAAGAAGAAAAAGCCTGATCAAATCACGCACTTAAGACGTGTCAGCCTTGATGAGCATGTGCCTACAGTACTTCCTGAACCTCAAACTCTTACTCAGTCATCGCGGTCTAGTAGAGGGAAATCCATTCACCCCATTAACAATGGTTACAACAACAGAACACGAGCATTATCTGCTCCATCATCTCTTGCTGCTGCAGAACAGGATGCTCCAGCCTCATTTGTGAATGAGAAACAAGAAAGGCCAAAGTGCCGAACAAGATCACTGAAGGAGCAGCAATTACCTGGACCACAACCTTTACCCCTTCCCACTCCTAAGGATGGTGGTGCATCAAAGGCTATTAACAGCCATAAGTCAGGGTTGGCTAGGGGTTCTAAAAATGCTTCTGGTTCAGCTCTTGATGCAGCAGAACAAGTTGATTTAGCCTCAATGAAGGAGTCTAAACAACAAGCTGGGGCAATGAAGGAGCAGCATTTACCTAATCCACAACCTTGCCCTCTTCCATATCCTCAGGGTGGTGGGGGTGCATTGAAGGCTACTGGCAACTTTAAGTTAGGGATGCCAACTTTTCCTCTATATGCTTCTGGATCTTTTCCCCTTCCATCCACTGGGCCACCTCGTTACTTTCTGTATGAGGAAATTGCTGCTGCTTGCCACAATTTCTCCTCAGATCAATGCATGGCAGAAGGTCTTTCTTCCACCATTTATAAAGCTTCCTTTGCTGATAATCATTCAACTTCAAAGGAGTTTGAAGCCACTATCACCCGCCTCCACCCATCAACTCAGGGTTTGAGGGAATTCATTAATGAGACAATGTATAATGAATTTTCAACAGCCAACATACAAATAGACAAAGATTTCAATGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCTGGGAAAGAGATTTCAAGCAGGCCACTCACTTTTGGAAACCTTTCATTGGAAACACTGGAAAGAGAAATGCTTAATGAAAAGAACAATGTATGGTGTTTTGGAATTGTTCTTCTGGAGCTACTTACTGGCAGAAAGAACATGGACACCCATCACCCCAAAGAGGAGAGGGACTTAATCAAGTGGACCAAGCCTTACCTTGCTGATGATTTCCGGCTGTCATTGATAATGGATCCTCAACTTAAGGGTCACTTTCCATCCAGAGCAGTGAGAGTAGTAGCTGACATTGTGCAGAGATGCCTCCAAAAGGAGCCATCAGACAGACCCAACATGAGAACCATTGTTGAGCATCTCAAAGTGATACAGGATATGAAGTACTGCTGTTGGTTCCCACTGCAAGAGCCAGCAGGCATGCCTAGGAAAGAAAAGCCAAAATCACCAAGTTTTGATGGCATCACTTCTCATGCACCTACATCAAGTTTCCCTCCATCATCATCATCAGTAGCAAGACCATCTTCTTCACCTCCAAGATGGGCTGGTGTGCCCACCCCACTTCCTTCTCCTTCTCCTTCTCCTTGTGCTTGTTCCTCCACTCCCTCAATTGGGGAGCCTAGTAAATAG 1545 0.4498 MGCFTIFMSKKKKPDQITHLRRVSLDEHVPTVLPEPQTLTQSSRSSRGKSIHPINNGYNNRTRALSAPSSLAAAEQDAPASFVNEKQERPKCRTRSLKEQQLPGPQPLPLPTPKDGGASKAINSHKSGLARGSKNASGSALDAAEQVDLASMKESKQQAGAMKEQHLPNPQPCPLPYPQGGGGALKATGNFKLGMPTFPLYASGSFPLPSTGPPRYFLYEEIAAACHNFSSDQCMAEGLSSTIYKASFADNHSTSKEFEATITRLHPSTQGLREFINETMYNEFSTANIQIDKDFNAKLSGYGCVGHIPGKEISSRPLTFGNLSLETLEREMLNEKNNVWCFGIVLLELLTGRKNMDTHHPKEERDLIKWTKPYLADDFRLSLIMDPQLKGHFPSRAVRVVADIVQRCLQKEPSDRPNMRTIVEHLKVIQDMKYCCWFPLQEPAGMPRKEKPKSPSFDGITSHAPTSSFPPSSSSVARPSSSPPRWAGVPTPLPSPSPSPCACSSTPSIGEPSK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi907g00010 514 ProSiteProfiles Protein kinase domain profile. 116 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi907g00010 514 PANTHER OS01G0588500 PROTEIN-RELATED 159 279 - -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 28 142 - -
Sebi907g00010 514 Pfam Protein kinase domain 281 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi907g00010 514 Gene3D Transferase(Phosphotransferase) domain 1 271 436 - -
Sebi907g00010 514 SUPERFAMILY Protein kinase-like (PK-like) 283 436 IPR011009 -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 34 69 - -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 446 514 - -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 459 481 - -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 82 96 - -
Sebi907g00010 514 MobiDBLite consensus disorder prediction 485 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi907g00010 Sebi-Chr907 169057 171449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi907g00010 279 430 Receptor kinase-like Gene Family AT4G02010 35.897 4.32e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Sebi907g00010 Pkinase 2.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi907g00010 - - csin:114294860 354.369