Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi907g00007 ATGGATGAAGAAGTAGCAATGATTCGAAAGAGGTTTGGAGACGAACAGAGCACTCTGTTGGACCAGTTTGAGAGGCTATCGTTTGAGTCTCACCTCAACAAAGCCATGTTGCAAAGAAGCCTATCAGAACCAGGATTGCCAAGGTCAGGGTCCCAATCAAGACTCCTTAGTGTGACACCAACACCAACAATACCTCTTGTGACTCAAGTGAAACAAGGGCGTTGTCGTGGGTCAGGGGGAGCTGCTGTGGGAGCAGTATTTGGAGAATTGTTGAAGGCGGTTTTGGAAATAAGAGACAAGGCCGTTATGTTCAAACAAACTTTGGCGAACCTCAGATCCACTCTAATAACAGTTGCTCCAATTATGAAAGAGATAGAGCAGCACAACATCGACCTAGGCCGTCCAAAAGAGGATCTTGAATCTCTGATAAGAGAAATGGAAGAGGGCACAAATCTTGTGTCCAAATGTGCAAAAATCCACAGATTAAATTTTATGGCCAGGGCTCGATACCAGGAGCGGCTAGAGGCATTAATGGATTCACTTGTAAGGTTTTTCATCATTGATATGCAAGCTCAGGCTACTAGAGATCAAAAGGAGACCCTGCTTAAAGTTAGAAAAATACTTAGCGCGGTCAATAAATTTCCTATGGTCAACGCAGAGGACACAACTGTTTCATCTTCTTACTTTTCCGCTGTGTCTCTGCCTGGGGACATGGAAACCAATTATAGTGAGGAAGCCATGGAACATATCATCGCTGTGAATGAGTCAGATTCAGAAACCCCTCACTCAACCGCTGAACAAGCCATGGAGCCTCTCACTAGCATCGCCGATGAGAGCAAAGCCAAAGCAGAGCATAATCAAGGAATGAATGAGAAATCCTATGAACAAGCAGCAGAGAGGAGATTCTTCGGCATCCGTCTACCTAATATAGATCTTGAAGATTTAATAATAGCTTCGGATGAAGTACTTGGGAAGGGAAGTTATGGACATACATATAAAGCCATCTTGGAGGATGGGAGAATGGTAGTTGTGAAGAGGCTAAAGAAAGCGATAGAGAAAACAGAATTTCAACGAGAAGTGAAGGTTGTGCACATGTTGAGTTCTGAGCACCCAAATGTTATTCCCCTTCGTGCATACTACTACCACGACCACGAGGGTGAAAAGCTTCTGATTTATGACTACATAATGGCTGGCAGTTTGTCCAGGTTTTTGCAAGCCCATGTCTCTGCCAACCCCCCTGAAAGTGAAGGCTACTGCTACCGAGCACCAGAGGTTGTTGAAACCGGACAGCTGACCCAAAAGTGTGATGTATACAGCTTCGGTGTTATCCTTTGCGAGATGCTGAATGATGTTGAACCACCACGCCGGAATTTATGCGAGGTTCTGGAATTGGTCCAGCGTCATGGGAGATGGACTCCACCAGACTCTGCCTGTCACCGTTACATTAGAAGACATGAGTGGGATATGTGGACACTTGCAGTGAACTGTGTGGCACGGGAACCTGAACGGAGACCTTCAATGGCGGAAGTAGTTAAGAACATCCAATCAATTCTTGACGAAAATTCAGGTTTCCTTATTTATGATCACTTTTTTGGGAATGATAAGGAGTTGCATTTGTTAAGTAACTGGGATTCAAATCTGCAGTGTCCAATCCCTAACCCTATCAATATCATCACTCCAATTCCAATTAGGAAAATGTTAGATAGACACAACAATATATAA 1722 0.4413 MDEEVAMIRKRFGDEQSTLLDQFERLSFESHLNKAMLQRSLSEPGLPRSGSQSRLLSVTPTPTIPLVTQVKQGRCRGSGGAAVGAVFGELLKAVLEIRDKAVMFKQTLANLRSTLITVAPIMKEIEQHNIDLGRPKEDLESLIREMEEGTNLVSKCAKIHRLNFMARARYQERLEALMDSLVRFFIIDMQAQATRDQKETLLKVRKILSAVNKFPMVNAEDTTVSSSYFSAVSLPGDMETNYSEEAMEHIIAVNESDSETPHSTAEQAMEPLTSIADESKAKAEHNQGMNEKSYEQAAERRFFGIRLPNIDLEDLIIASDEVLGKGSYGHTYKAILEDGRMVVVKRLKKAIEKTEFQREVKVVHMLSSEHPNVIPLRAYYYHDHEGEKLLIYDYIMAGSLSRFLQAHVSANPPESEGYCYRAPEVVETGQLTQKCDVYSFGVILCEMLNDVEPPRRNLCEVLELVQRHGRWTPPDSACHRYIRRHEWDMWTLAVNCVAREPERRPSMAEVVKNIQSILDENSGFLIYDHFFGNDKELHLLSNWDSNLQCPIPNPINIITPIPIRKMLDRHNNI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi907g00007 573 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 79 206 IPR008808 -
Sebi907g00007 573 Gene3D Transferase(Phosphotransferase) domain 1 391 528 - -
Sebi907g00007 573 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 280 406 IPR046959 -
Sebi907g00007 573 ProSiteProfiles Protein kinase domain profile. 317 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi907g00007 573 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Sebi907g00007 573 Pfam Protein tyrosine and serine/threonine kinase 419 513 IPR001245 GO:0004672|GO:0006468
Sebi907g00007 573 ProSiteProfiles RPW8 domain profile. 64 223 IPR008808 -
Sebi907g00007 573 Gene3D Phosphorylase Kinase; domain 1 281 390 - -
Sebi907g00007 573 MobiDBLite consensus disorder prediction 39 58 - -
Sebi907g00007 573 SUPERFAMILY Protein kinase-like (PK-like) 320 518 IPR011009 -
Sebi907g00007 573 MobiDBLite consensus disorder prediction 44 58 - -
Sebi907g00007 573 Pfam Protein kinase domain 320 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi907g00007 Sebi-Chr907 88659 94668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi907g00007 280 517 Receptor kinase-like Gene Family AT5G58300 33.548 1.02e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi907g00007 RPW8 7.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi907g00007 - - aip:107625870 259.996