Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi907g00006 ATGACGCAAGTGCAATTCATCCTATCCTTGTTTCTTGTTCTTTTTGGTCCACTCCTAGTGATCTCAGTAGACCAAGCTTTCAACGATGATGTCCTGGGGTTGATTGTGTTCAAGGCTGGTCTTGAAGACCCAAAAGGTAAACTCTCTACGTGGAGTGAAGATGATTCTAGTCCCTGCAATTGGAATGGTGTCAAATGTGACCCTGCAACCAATAGGGTATCTGCTCTTGTCCTTGATGGATTCTCTCTTTCTGGCCACATTGGTAGAGGGCTTCTGAGATTGCAATTCCTTCAAATTTTGTCCCTTTCTAGGAATAACTTCACAGGGACCTTAAACCCTGATCTTCTTAGCTTTCGGAATTTACAAGTTGTTGATTTGAGTGAGAACAACCTCTCTGGGTCAATCCCATATGGACTTTTCCAGCAATGTTGGTCTCTAAGAGTGGTATCATTTGCAAAAAACAACCTCACAGGTAAGATTCCTGATTCTTTGAGCTCCTGCTCCTCATTAGCAACTCTGAACTTTTCCTCTAATCTGCTAAATGGGGAACTACCATCTGGGATGTGGTTTTTGAGGGAACTACAGTCACTTGATCTGTCAAATAACTTGCTGGAAGGAGAGATTCCTGATGGAATTCAGAATCTTTATGATTTGAGGGAGTTGAGGCTAGGGAAGAATCACTTCACTGGTAGGCTTCCTGTGGATATTGGAGGCTGCTTGCTTTTGAAGTTGATTGATATCAGTGGCAATTTTCTATCTGGGAAACTTCCTGAGTCAATACAAAGACTCACCTCATGCACATTCCTCAGTTTGCAAGGAAATTCATTCACAGGACATGTTCCAAATTGGATTGGAGAATTGAAAAATCTTGAGATATTAGATCTTTCTGCAAATACATTTTCTGGTTGGATTCCAAAATCAATAGGAAATCTTGACTCGTTGAGTAGATTAAATCTGTCCAGGAATCAGCTCACAGGAAACCTGCCAGAGTCAATGGTAAACTGCATTAAGCTTTTGACTCTTGACATCAGTCACAATCACTTGGCAGGACTTATTTCTTCATGGATATTTAGGATGGGCTTACAAAGCATCTCACTTTCTGGGAACAGCTTCAGTAAGAGCAATTATCCTTCACTTACTTCTATACCTGTATCTTATCATGGCCTTCAGGTTTTGGACTTGTCATCAAATGCATTTTCTGGCGAACTTCCATCTGGCATTGGAGGTCTTAGTAGTTTGCAAGTCTTAAATTTGTCCACCAACAATATCTCTGGTTCTATTCCAGTCAGTATAAGAGAACTTAAATCATTATACATTCTTGACTTCAGTGACAACAGGCTTAATGGAAGCATCCCTTCTGAAATAGAAGGGGCAATTTCACTCAGTGAACTGAGGCTACAAAAGAACTTCATAGGTGGGAGAATTCCATCCCAAATTGAGAAGTGTTCATCTCTCACATATTTTGAAAAACTTTTCCTTACTAGGAATCTTGCTCACAACAAGCTTATTGGTTCAATCCCTGCACCCATTGCAAACCTAACCAATCTTCATCATGTAGATTTGTCATGGAATCAACTCTCTGGAAGCCTACCCAAGGAGCTGGCAAATCTTACCCAGCTTTTCTCATTTAATGTTTCCCATAACCATCTTCAAGGTGAGCTACCAGTGGGTGGCTTCTTCAATACCATCTCTCCCTTATCAGTCTCTGGTAATCCATTGTTATGTGGTTCTGTTGTTAACCACTCTTGCCCATCTGTCCATCCAAAACCTATTGTCCTAAACCCCAATTCTTCTTACTCAAACTCCAGAGCTTCCTTACAAAATCATCATCATAAGATCATGCTCAGCATCTCTGTCCTTATTGCTATTGGTGCAGCTATTTTTATTGCCATTGGTGTGGTGGCTGTTACTGTCCTAAATATTCATGTGCAATCTTCAAAGTCACACTCTGCTGCTCCATTTGCATTCTCTGGTGGTGAGGACTATAATTGTTCCCCCACAAATGATCCAAACTATGGCAAGCTTGTGATGTTTTCTGGTGATGCTGAATTTGCTGATGGAGCTCACAATCTTCTTAACAAAGACAGTGAAATTGGTCGTGGTGGATTTGGGGTTGTTTATTGCACTGTCCTTCGAAATGGGCGTTCTGTTGCAATCAAGAAACTTACAGTGTCCAGTTTGACTAAGTCCCAAGAAGACTTTGAAATGGAGGTTCAAAAGCTTGGGAAGATCAGGCACCAGAATCTTGTGACACTTGAAGGTTATTACTGGACTTCATCCTTACAGCTCCTTATTTATGAGTACCTAGCTAGAGGGAGTTTGCACAAGCTTCTACATGATGATAATAGCAAAATTGTTTTTTCTTGGCGACAAAGGTTCAAGATTATTCTAGGAATGGCAAAAGGGTTGGCCTATTTGCACCAAATGAACATAATCCATTATAATCTAAAATCAACAAATGTTTTGATTGATTGTTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAGTTCAAAGTGCACTTGGATACATGGCTCCTGAGTTTGCTTGCCGCACAGTTAAGATAACTGAGAAATGTGATATATATGGTTTTGGAATCCTGGTTCTGGAGGTGGTGACAGGAAAAAGACCTGTGGAATATATGGAAGATGATGTGGTTGTTCTATGTGAAATGGTGAGGGGTGCACTGGAGGATGGCAAGGTGGAGCAATGTGTTGATGGGAAGCTTGTAGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATGAAATTGGGGTTAGTTTGTGCATCACAAGTGCCTTCAAACCGTCCAGATATGGCTGAGGTAGTCAACATATTAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTACAATGA 2928 0.4098 MTQVQFILSLFLVLFGPLLVISVDQAFNDDVLGLIVFKAGLEDPKGKLSTWSEDDSSPCNWNGVKCDPATNRVSALVLDGFSLSGHIGRGLLRLQFLQILSLSRNNFTGTLNPDLLSFRNLQVVDLSENNLSGSIPYGLFQQCWSLRVVSFAKNNLTGKIPDSLSSCSSLATLNFSSNLLNGELPSGMWFLRELQSLDLSNNLLEGEIPDGIQNLYDLRELRLGKNHFTGRLPVDIGGCLLLKLIDISGNFLSGKLPESIQRLTSCTFLSLQGNSFTGHVPNWIGELKNLEILDLSANTFSGWIPKSIGNLDSLSRLNLSRNQLTGNLPESMVNCIKLLTLDISHNHLAGLISSWIFRMGLQSISLSGNSFSKSNYPSLTSIPVSYHGLQVLDLSSNAFSGELPSGIGGLSSLQVLNLSTNNISGSIPVSIRELKSLYILDFSDNRLNGSIPSEIEGAISLSELRLQKNFIGGRIPSQIEKCSSLTYFEKLFLTRNLAHNKLIGSIPAPIANLTNLHHVDLSWNQLSGSLPKELANLTQLFSFNVSHNHLQGELPVGGFFNTISPLSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSYSNSRASLQNHHHKIMLSISVLIAIGAAIFIAIGVVAVTVLNIHVQSSKSHSAAPFAFSGGEDYNCSPTNDPNYGKLVMFSGDAEFADGAHNLLNKDSEIGRGGFGVVYCTVLRNGRSVAIKKLTVSSLTKSQEDFEMEVQKLGKIRHQNLVTLEGYYWTSSLQLLIYEYLARGSLHKLLHDDNSKIVFSWRQRFKIILGMAKGLAYLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPMLDHCVLSSKVQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGKRPVEYMEDDVVVLCEMVRGALEDGKVEQCVDGKLVGNFAAEEAIPVMKLGLVCASQVPSNRPDMAEVVNILELIQCPSEGQEELQ 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi907g00006 975 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 307 587 - -
Sebi907g00006 975 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Sebi907g00006 975 Gene3D Ribonuclease Inhibitor 307 589 IPR032675 -
Sebi907g00006 975 Gene3D Ribonuclease Inhibitor 27 306 IPR032675 -
Sebi907g00006 975 SMART LRR_sd22_2 191 214 - -
Sebi907g00006 975 SMART LRR_sd22_2 287 313 - -
Sebi907g00006 975 SMART LRR_sd22_2 513 539 - -
Sebi907g00006 975 SMART LRR_sd22_2 434 457 - -
Sebi907g00006 975 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Sebi907g00006 975 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 28 306 - -
Sebi907g00006 975 SUPERFAMILY L domain-like 45 376 - -
Sebi907g00006 975 CDD STKc_IRAK 698 964 - -
Sebi907g00006 975 SUPERFAMILY Protein kinase-like (PK-like) 693 965 IPR011009 -
Sebi907g00006 975 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Sebi907g00006 975 Gene3D Phosphorylase Kinase; domain 1 675 768 - -
Sebi907g00006 975 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 769 970 - -
Sebi907g00006 975 PANTHER LEUCINE RICH REPEAT KINASE 2 212 964 - -
Sebi907g00006 975 ProSiteProfiles Protein kinase domain profile. 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi907g00006 975 Gene3D Transferase(Phosphotransferase) domain 1 769 973 - -
Sebi907g00006 975 Pfam Protein kinase domain 693 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi907g00006 975 SUPERFAMILY L domain-like 361 576 - -
Sebi907g00006 975 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Sebi907g00006 975 Pfam Leucine Rich Repeat 242 263 IPR001611 GO:0005515
Sebi907g00006 975 Pfam Leucine Rich Repeat 515 537 IPR001611 GO:0005515
Sebi907g00006 975 SMART LRR_typ_2 311 335 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 118 142 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 537 561 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 215 239 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 434 458 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 410 433 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 287 310 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 513 536 IPR003591 -
Sebi907g00006 975 SMART LRR_typ_2 191 214 IPR003591 -
Sebi907g00006 975 PRINTS Leucine-rich repeat signature 338 351 - -
Sebi907g00006 975 PRINTS Leucine-rich repeat signature 410 423 - -
Sebi907g00006 975 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 686 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi907g00006 Sebi-Chr907 76508 79600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi907g00006 20 974 Receptor kinase-like Gene Family AT3G56370 61.059 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Sebi907g00006 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi907g00006 - - gmx:100791204 1597.41