Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi905g00007 ATGACTTTGGCTTCATCATCAACAACAACTAAACAAGTTGGTGCACCAAAAGCTGATATTGTGGTGGCTCAAGATGGCATTGGGAATTATAAGACCATATCAGAAGGTGTGGCTGCAGCTGCTAAGCTTAGTGGAAAATGGGGAGTTGTTATTCACGTCAAAGCAAGTGTTTATAAAGAGAGTGTTGACATTAAGAGGTCAATGAAGAACTTGATGATCATTGGAGATGGGATGGGTTTCACTATTGTTACTGGCAATAATAATGCACAAGATGGCTCCACTACGTTTCGTTCAGCCACTTTCGGGAATGAAGAAGAAATACCTGCTACGAGAATGAAGCTCTTGAGGAAGCCAACAATGGCGGACTGA 369 0.4201 MTLASSSTTTKQVGAPKADIVVAQDGIGNYKTISEGVAAAAKLSGKWGVVIHVKASVYKESVDIKRSMKNLMIIGDGMGFTIVTGNNNAQDGSTTFRSATFGNEEEIPATRMKLLRKPTMAD 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi905g00007 122 SUPERFAMILY Pectin lyase-like 15 102 IPR011050 -
Sebi905g00007 122 PANTHER PECTINESTERASE 18 103 - -
Sebi905g00007 122 Pfam Pectinesterase 19 104 IPR000070 GO:0030599|GO:0042545
Sebi905g00007 122 Gene3D - 14 112 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi905g00007 Sebi-Chr905 130875 131315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi905g00007 17 102 Carbohydrate Esterase AT1G23200 62.069 1.29e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi905g00007 - - gmx:100816802 149.443