Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi904g00006 ATGGTGGCTTTTGGCGGGAAAAAAGTTGGCCAAATGGTCGTCGGCTTCGGCGGCAGTGGTCTCGGCCAGGTCGTCATCGCCGTCACCGTCTCCTTCCTTGTCCGCGTCTTCTCTGCTCCCGGCCCCGCCCTCTTGCCGGAGAACGACGATGACGACGATGTGCCGAACAACGATTCCCACAACGGTGAAACTTCGCCCTCCGGAAAGGTCACGCCGGTCACAATCCGCTGGAACAGTATCAATTGTTCCCTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCGAAGCCTGGAAGATTGTTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTGGGAGCATCGCCATGGCTGCATTTGACGGGCCTTTTGGAGTTCAATGGAAAGCCTCGTTCCAAAAACCCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCACAGCTCACAGTGCGGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCGACCTATCTTCCGCAGAAGAGAGAGATGAATATGTGAACAATCTCCTTTTCAAACTAGGCTTGATCAGTTGTGCTGATACCAATGTCGGTGATGCAAAAGTTCGTGGAATTAGCGGTGGTGAAAAGAAACGCTTATCAATGGCATGTGAATTGCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACACTCCAGCAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTGACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAAGCATTGGCATACTTCTCAAGATTCGGGTCATTGTCTTAA 963 0.4881 MVAFGGKKVGQMVVGFGGSGLGQVVIAVTVSFLVRVFSAPGPALLPENDDDDDVPNNDSHNGETSPSGKVTPVTIRWNSINCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLGASPWLHLTGLLEFNGKPRSKNPYKFAYVRQEDLFFSQLTVRETLSLATELQLPDLSSAEERDEYVNNLLFKLGLISCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEALAYFSRFGSLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi904g00006 320 CDD ABCG_EPDR 72 303 - -
Sebi904g00006 320 MobiDBLite consensus disorder prediction 44 71 - -
Sebi904g00006 320 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Sebi904g00006 320 Gene3D - 69 312 IPR027417 -
Sebi904g00006 320 Pfam ABC transporter 96 248 IPR003439 GO:0005524
Sebi904g00006 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 307 IPR027417 -
Sebi904g00006 320 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 63 314 - -
Sebi904g00006 320 SMART AAA_5 105 298 IPR003593 GO:0016887
Sebi904g00006 320 FunFam ABC transporter G family member 7 73 311 - -
Sebi904g00006 320 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 319 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi904g00006 Sebi-Chr904 69026 73330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi904g00006 81 299 Calmodulin-binding Proteins AT2G36910 27.354 1.22e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi904g00006 K05681 - gmx:100788256 541.576