Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi903g00002 ATGGCCCCTTCTTTAGAATTCAATGGTGAAGACAATAATGTTATATTAGGAGGACACACCCAACAGGATGATGGCGTTAATTTAGCCATACAATGGGTAAGTTCAATTGTGTTTCCCTTGACTTTGCAGGCAGTGACCGAGCTGGGTATATTTGATATCATAGCCAAATCTGGTGAAGGTGCCAAACTCTCTGCAAATGACATTGCATCTCAAATTGGCACCAACAACCCAGAAGCACCCATAATGCTTGATCGTCTACTTAGGTATTTGGCTAGTTACTCTGTGTTACATTGCTCTATCCTTCAAGATACACAAAGGCTTGGATCAGGATCACCTCAACGTCTCTATAGCCTCACCCCTGCTTCCAAATATTTTTTGACTGATGCTGATGGTGTCTCACTTGGCCCCTTCTTGGCCTTGCTTATGGACAAGGTCCCCTCTCAAAGCTGGACCAAACTAAAAGAAGTGATCCTAGAAGGCGGTGTAGCATTCAAGAGGGTGTATGGCATGCATCTCTTTGAGTACACAAGGGTAGATACTGGGTTTAATGATGTTTTCAACAAAGGTATGCTTAGCTCCACCACAGTGACTATGAAGACGATTCTTGAACTCTACACTGGTTTTGAGCACATTAATAGATTGGTGGATGTTGGTGGTGGTCTTGGGGTCAATCTCAAATTGATCACTTCCAAATACCCTCATATCCAAGGTGTTAATTTTGACCTGCCTCATGTCATTGAACAGGCTCCTTCCTATGTTGGCGTGGAGCATGTAGGGGGAGATATGTTTGAGGGCGTACCTGAAGGAGATGCCATTTTTATGAAGTGGATTCTTCATGATTGGGGTGATGAACACTGCGTAAAGCTCTTGAAGAATTGTTATAAAGCTATTCCCGGTGATGGAAAGGTTATTATCGTGGACACGATCCTTCCCAATGTACCTCAAACAACAACAACAACCAAAAATGCTTTCACATATGACCTTTTCATGTTGGCTCAATTTCCAGGAGGGAAGGAGCGAACCCAACAAGAATTCATGGAGTTGGCAACGAAATCTGGATTTAGTGGCATCAAAATCATCTTACTCCTAATAACTATCTTTTATGGAGATCCCAGATGTCTTGGCCCAGATTATAACTCCTTTACTACCATAATGTTGCGTCCTCCTATCCCCTCATATTATTCTGTACTTCCTCGACTGGTCAACTATGATACCGGGATTAATTATCTTCAAAGGACATCTTCTACCTCTGCTTTTTACACAACTCGTGACTCAAGGTCACATAGCCGCAAGCAACAACAGTCCACTAAGCCTCGTTCTTCCCGGCAACAATTCACTTCTAAAGGCCGAGGTTTCACTCCTCACACCAATGCTACTCCAGGGAACTCAAAGGCACCAACCAAAGCATTCAACCATCCAGTCATATGCCAAATATGTAAGGGCAAAAATCATGATGCATTAGCATGCCCCCAGCGCTATAACCATGCTTTTCAGTCAAAATCGTTATCTCCAGCACTAGCGGCAATGACACTTAATGAACCTGAGGACTCAAATGCATGGATTCCAGACTCTGGGGCTAGTGCTCATATGACTTATGATGCAGGTATTCTATCTAATCTTCGTCCATATCATGGTAATAAGTATGTGGCTATTGGGAATGGTGTTGTTCTTGATATATCTCATACTGGTGATACTCTTGTCCCTATGCCTTCGGGGTCTTCCTTATCATTAAAGAATGACAAGAAGACGGGGATGATTTTGGTCAAGGGGACGAGGAAGGGGGATGTTTATTCACTCCCACAACAGATTAATGCCCAGTATTCTACCAGGAGCAATTCAAGTGTCAAAGAAGAAGTCTTTTCCGTTTATATGTGA 1875 0.4293 MAPSLEFNGEDNNVILGGHTQQDDGVNLAIQWVSSIVFPLTLQAVTELGIFDIIAKSGEGAKLSANDIASQIGTNNPEAPIMLDRLLRYLASYSVLHCSILQDTQRLGSGSPQRLYSLTPASKYFLTDADGVSLGPFLALLMDKVPSQSWTKLKEVILEGGVAFKRVYGMHLFEYTRVDTGFNDVFNKGMLSSTTVTMKTILELYTGFEHINRLVDVGGGLGVNLKLITSKYPHIQGVNFDLPHVIEQAPSYVGVEHVGGDMFEGVPEGDAIFMKWILHDWGDEHCVKLLKNCYKAIPGDGKVIIVDTILPNVPQTTTTTKNAFTYDLFMLAQFPGGKERTQQEFMELATKSGFSGIKIILLLITIFYGDPRCLGPDYNSFTTIMLRPPIPSYYSVLPRLVNYDTGINYLQRTSSTSAFYTTRDSRSHSRKQQQSTKPRSSRQQFTSKGRGFTPHTNATPGNSKAPTKAFNHPVICQICKGKNHDALACPQRYNHAFQSKSLSPALAAMTLNEPEDSNAWIPDSGASAHMTYDAGILSNLRPYHGNKYVAIGNGVVLDISHTGDTLVPMPSGSSLSLKNDKKTGMILVKGTRKGDVYSLPQQINAQYSTRSNSSVKEEVFSVYM 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi903g00002 624 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 373 IPR016461 GO:0008168
Sebi903g00002 624 Pfam O-methyltransferase domain 150 355 IPR001077 GO:0008171
Sebi903g00002 624 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 361 IPR029063 -
Sebi903g00002 624 Gene3D Vaccinia Virus protein VP39 183 360 IPR029063 -
Sebi903g00002 624 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
Sebi903g00002 624 SUPERFAMILY "Winged helix" DNA-binding domain 23 128 IPR036390 -
Sebi903g00002 624 MobiDBLite consensus disorder prediction 434 466 - -
Sebi903g00002 624 MobiDBLite consensus disorder prediction 420 466 - -
Sebi903g00002 624 FunFam Caffeic acid 3-O-methyltransferase 10 125 - -
Sebi903g00002 624 Gene3D - 37 201 IPR036388 -
Sebi903g00002 624 FunFam Caffeic acid O-methyltransferase 126 368 - -
Sebi903g00002 624 PANTHER O-METHYLTRANSFERASE 33 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi903g00002 Sebi-Chr903 26826 31257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi903g00002 23 360 Monolignol Biosynthesis Gene Families AT5G54160 53.254 1.77e-129 383