Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi902g00010 ATGCAGGAAATACATTCCATCGGCGGCGGAGATAGGAGGCTGAGGCCACACCACCACAACCAGCAACTTCAGCCGTTGAAGTGTCCCCGATGTGACTCCTCCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAAAACTGCCGCAGCGAGAGCTCCACCCTCACCGCCGTCGCTGCCACGGAGGCGATGTCGGCGCCGACATCAAACCCTCCGTTGGAGAACATTCGCGAGACCAAGGTGTTCGCAAACCCTTCTTTGGAGCTGGAACAGGGAGGTGGTGGCGTATTACGGAGCTTCACGAGCCTCGTCACTTCAACCAGCAACGCATTGCCGTTTGTGTTTGGGAATAATAACTTCCTCGATGCGTCGTCGTTTCGGTTCGGCACTAATCATCAGCAGGGGAACGATCAGGTACACGTGGCACCAGGTGGTGGCCCGCATGGTGAGTGCCAGTGGCAACAGCAGAGGGTGATTGGCTTGAGCGGTGATCATCACCATCAGGAGTTTGAGGAGGCGTCGCTGCTGCATCACACGGTGCCTGTTGAGTTTTCTTCGCTGCAAAATAAAACTGATCAGCATGGTGGAGGATTTGGATCGTTGGATTGGAATGCCGGTGCAGATCAAGGTTTGTTTGATCTTCCTAACACCCTTGATCAGCCTTATTGGACCCACACTCACTGGTCTGATCAAGACAATTCTACTCTCTTTCATCTTCCCTGA 747 0.5355 MQEIHSIGGGDRRLRPHHHNQQLQPLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRSESSTLTAVAATEAMSAPTSNPPLENIRETKVFANPSLELEQGGGGVLRSFTSLVTSTSNALPFVFGNNNFLDASSFRFGTNHQQGNDQVHVAPGGGPHGECQWQQQRVIGLSGDHHHQEFEEASLLHHTVPVEFSSLQNKTDQHGGGFGSLDWNAGADQGLFDLPNTLDQPYWTHTHWSDQDNSTLFHLP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi902g00010 248 MobiDBLite consensus disorder prediction 1 18 - -
Sebi902g00010 248 Pfam Dof domain, zinc finger 25 58 IPR003851 GO:0003677|GO:0006355
Sebi902g00010 248 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Sebi902g00010 248 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 57 IPR045174 GO:0003700|GO:0006355
Sebi902g00010 248 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi902g00010 Sebi-Chr902 153107 154033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi902g00010 11 57 C2C2-Dof Transcription Factor Family AT5G60850 75.510 1.69e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sebi902g00010 zf-Dof 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi902g00010 - - cave:132184123 211.075