Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00105 ATGGTGGGGCAACCAAACACCAACACTGCACAGTCAATGTTCAGCTCACCAGAAAAGCTTCCTAGGAGAGGTGCAAAGTTCATTTTGAAGGATGTAAATTGTGAGGCAAGGTCAGGGGAACTCACAGCTATTGCCGGTCCTAGTGGAGCTGGAAAAACCACACTGCTTGAAATTCTTGCAGGGAGAATACCCCCATGTAAAGTGTCTGGGCAAGTGCTTGTCAATCATAGGCCTATGGATGTGCACAGATTCAGAAGAACATCTGGGTATGTCACACAGGAAGATGCTTTGTTCCCATCACTTACAGTTAGAGAGACATTCATGTATAGTGCTTTGCTGAGGCTTCCTGGGGGGCGAAAAGTGGCTGTCATCAGAGTTGCAGAGTTGATGAAGGAGCTTGGATTGGATCATATTGCAGAATCAAGAATTGGTGATGGATCAGATCATGGCATATCAGGTGGGGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTAGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTCAACGTAGTCTCATTGCTTAGATTAATGGCATTTAATCAAGGTAAGACAATTATTTTAACTATCCACCAACCTGGTTTCCGAATCCTAGAGCTATTTGATGGCCTCATTTTGCTGTCTGATGGATTTGTCATGCATAATGGGTCATTGAATCTTCTTGAGGCTAGGCTCAAGTTAGCTGGGCATCACATTCCTGACCATGTCAATGTCCTAGAATTCGCTCTTGATGTCATGGGAAGCTTGGTCATACATACTTCAGAATCTCGGAACAACCAATTTCTTCTCAATGACACAGAGCACAGAGATCACAAGATGAGGATGCAATATTCTAAGATTGTCAAAGAAAAGGCTCTTTTGTACTCAAATTCCCCAATAGAGGAGATTTTAATCCTAGGACAGAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGTCACCAGGGTCATACAGGCCATAGTAGCTGGATTTGTACTGGGAACCATATTTTTGAATGTTGGCAACCAACAAAGTCATGTAGCATTGCAAACACGAAGTGGCTTCTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGCCTGCCTATTTTCTTGGAGGAGAGAAGAACTCTGATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACCTTTGTGTTTCTTCCTTTCCTTCTAATGGTTGGTCTTCTGTACAGTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATTGATGGTTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTGCTCATGTCGAATTCTCTTGTGGCTTGTTTCAGCGCACTAGTGCCAAATTTCATCCTGGGAACCTCAGTGATTGCAGGTCTAATGGGATCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGAAAAAATACCCAGTTACTGGATTTTTATGCACTACCTGAGTCTATTCAAGTACCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGAGAGCAGGGGAAAAGGAGATGCATAGAAATTAGCAATGGAGAATGCATATTACACGGAGCTGAGTTCTTAAGACAACAGGGTCTGAAAGAAACACATAAATGGACCAATTTGGCTGTAATGTCGAGCTTTATACTGGGGTATAGAGTGCTTAGCTTTTTATTCTTTGGTCCAGATGTTACAGAACCAGAAAATAGATCAGGTTCACAACAGTATTAG 1794 0.4186 MVGQPNTNTAQSMFSSPEKLPRRGAKFILKDVNCEARSGELTAIAGPSGAGKTTLLEILAGRIPPCKVSGQVLVNHRPMDVHRFRRTSGYVTQEDALFPSLTVRETFMYSALLRLPGGRKVAVIRVAELMKELGLDHIAESRIGDGSDHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLMAFNQGKTIILTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLKLAGHHIPDHVNVLEFALDVMGSLVIHTSESRNNQFLLNDTEHRDHKMRMQYSKIVKEKALLYSNSPIEEILILGQRFCSNIFRTKQLFVTRVIQAIVAGFVLGTIFLNVGNQQSHVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTLMRETSRGAYRVSSYVLANTFVFLPFLLMVGLLYSTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYLSLFKYPFECLMINEYGGEQGKRRCIEISNGECILHGAEFLRQQGLKETHKWTNLAVMSSFILGYRVLSFLFFGPDVTEPENRSGSQQY 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00105 597 CDD ABCG_EPDR 21 234 - -
Sebi8g00105 597 Pfam ABC-2 type transporter 209 298 IPR043926 GO:0140359
Sebi8g00105 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 244 IPR027417 -
Sebi8g00105 597 SMART AAA_5 38 229 IPR003593 GO:0016887
Sebi8g00105 597 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Sebi8g00105 597 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 575 - -
Sebi8g00105 597 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 8 252 IPR003439 GO:0005524
Sebi8g00105 597 Gene3D - 21 250 IPR027417 -
Sebi8g00105 597 Pfam ABC-2 type transporter 313 524 IPR013525 GO:0016020|GO:0140359
Sebi8g00105 597 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524|GO:0016887
Sebi8g00105 597 FunFam ABC transporter G family member 10 14 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00105 Sebi-Chr8 3534024 3536242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00105 21 239 Calmodulin-binding Proteins AT2G36910 27.948 2.83e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00105 K05681 - gmx:100776372 979.933